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tidyCDISC 0.2.1 (CRAN Release)

General

• Fixed bug accessing files in app/www/ (#166)
• Improved documentation
  • Added vignette announcing release of v0.2.1
  • Added highly visible links to Blog, YouTube, and NEWS file

Table Generator

• Made the html output in the app look slightly more “CSR-like” using minor formatting tricks (#181)
• Arranged visits in chronological order for dropdown list found in Stat blocks (#154)
• Fixed bug where wrong options were being passed on some lab tables (#169)
• Fixed bug where draggable blocks were not working without inclusion of datasets with ATPT (#173)

Population Explorer

• Fixed bug where selected filters were not being applied when ‘Apply Filters’ was toggled on (#175)
• Fixed bug where plots’ visual appeal was destroyed when faceting variable labels were too long (#200)
• Fixed bug where scatter plot wouldn’t display by categorical variable with NA values (#192)
• Allowed for one-element lists in heatmap axis dropdowns (#214)

Individual Explorer

• Updated the look of the time visualization (#194)
  • Moved the event description to a tooltip instead of a label
  • Incorporated end dates (where applicable) to display ranges
  • Removed the auto-zoom when multiple groups were selected

tidyCDISC 0.2.0 (CRAN Release)

• Added RTF export option for download from the Table Generator.
• Cleaned up JS to ‘standard analyses’ drop down.
• Created “ALL” as dropdown option for ‘standard analysis’ Table 41 instead of auto populating all available weeks in the drop zone.
• added protocol / study id in prominent location on each tab
• designed ATPT variable integration in the Table Generator (when present in data)
• added OS Health & riskmetric badges to the README
• engineered more user-friendly function to create the table generator output from the block data
• ensured Table Generator output automatically updates the table name when a ‘standard analysis’ is selected
• Fixed some Population Explorer filtering issues
• Added an app.R file so that shiny app can be ran directly from shiny::runGitHub() or runUrl()

tidyCDISC 0.1.1

• automated a footnote with Source and Run Date in table generation
• allowed custom user-defined footnotes
• allowed the selection of ‘All’ when a time/visit-based statistic is chosen in the table generator
• cleaned up downloadable R Script to replicate table generator output
• fixed bug where data_from was erroneously listed as a grouping option in the population explorer

tidyCDISC 0.1.0 (CRAN Release)

• cleaning up devtools::check() & preparing for CRAN release.
• unfortunately, had to revert back to importing tippy 0.1.0 since it is the latest available version on CRAN and CRAN pkgs cannot depend on package versions under development.
• created a new toggle on the Data tab that allows users to select which CDISC pilot study data sources they wish to use in the app.
• Minor bug improvements

tidyCDISC 0.0.4

• cleaning up devtools::check() & preparing for CRAN release.

tidyCDISC 0.0.3

• For tippy package, added lower bound on to version 1.0.0 since it includes more user friendly options.

tidyCDISC 0.0.2

This release (PR #65) performs a lot of functions, testing on many non-pilot ADSL files to ensure app’s robustness beyond just the CDISC pilot data:

• closes #64: Agg class objects lost “droppability” when only ADSL uploaded
• gets rid of annoying font awesome message about verifying an icon exists
• updates gt code that was deprecated
• Made sure ‘PARAM’ exists in the data when trying to label a block
• got rid of unnecessary argument in col_for_list() and col_for_list_expr()
• added some code that helped the FREQ block produce the correct results when ran locally (via a reproducibility script)
• a little code clean up for readability

tidyCDISC 0.0.1

This release adds meat to the previous skeleton version of tidyCDISC. The initial development release was intended to be a “bare bones” platform that could serve as a foundation to build a great clinical data exploratory tool. Version 0.0.1 enriches the user experience by adding useful & commonly needed features for analysis. For more on this release, see the announcement on our blog.

• Major Features added, by tab:
  • Table Generator
    • New “STAT Blocks”, such as Y FREQ, MAX FREQ, NON-MISSING, and a pair of NESTED FREQ blocks
    • Interact with ADAE
    • 17 new ‘standard analysis’ tables in the ADAE and ADLB space.
    • An R Script download-er to reproduce analysis performed in the app
  • Population Explorer
    • New Chart types
      • line plot - means over time
      • Heat map - endpoint correlations
      • Kaplan Meier Curve (when TTE class data uploaded)
• Upgraded pkgdown site documentation to be more robust and hassle-free for developers
• Depends on updated version of IDEAFilter (>= 0.1.0.9000)
• Squashed bugs and other minor improvements

tidyCDISC 0.0.0.9000

• Added a NEWS.md file to track changes to the package.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.