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Version 1.70.5

Updated references.

Version 1.70.4

Removed C++20 dependency

Version 1.70.3

Version numbering has improved to include the number of statistics available.

Version 1.1.3

• Reduced dependencies, Matrix and RSpectra are no longer required (but availability will improve speed!)
• calc_all_stats, calc_topology_stats and calc_brts_stats no longer return a named list, but return a named vector, for ease of rapid calculation across many trees

Version 1.1.2

• Removed dependencies to nodeSub by integrating functions to generate fully balanced and unbalanced into treestats.
• Renamed ‘calc_balance_stats’ to ‘calc_topology_stats’, and included only statistics that take the topology (without the branch lengths) into account.

Version 1.1.1

Added the following statistics:

• minimum(>0) eigenvalue of the Adjacency matrix

• maximum eigenvalue of the Adjacency matrix

• minimum(>0) eigenvalue of the Laplacian matrix

• maximum eigenvalue of the Laplacian matrix

• double cherries

• root imbalance

• four prong

Renamed eigenvector to eigen_centrality (in line with the analogous function in igraph)

Version 1.1.0

Add several new statistics:

• Colless-corrected

• Colless-Quadratic

• Total path index

• Total internal path index

• Average vertex depth

• Max Width over Max Depth

Version 1.0.7

• Added checks to each statistic verifying the statistic requires an ultrametric or binary tree - this should avoid some rare instances where memory access violations would pop up when providing a non-binary tree to a statistic assuming a binary input phylogeny. Many thanks to Fien Strijthaegen for pointing this out.

Version 1.0.6

• Added treeness statistic

Version 1.0.5

• Squashed a bug in imbalance_steps that would incorrectly calculate for smaller trees
• Added bioRxiv link to DESCRIPTION
• Added CITATION file

Version 1.0.4

• Corrected wording of variation in branch length statistics to correctly reflect variance, instead of variation

Version 1.0.3

First release to CRAN

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.