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Philipp Probst
The development version
devtools::install_github("PhilippPro/tuneRanger")CRAN
install.packages("tuneRanger")tuneRanger is a package for automatic tuning of random forests with one line of code and intended for users that want to get the best out of their random forest model.
Model based optimization is used as tuning strategy and the three parameters min.node.size, sample.fraction and mtry are tuned at once. Out-of-bag predictions are used for evaluation, which makes it much faster than other packages and tuning strategies that use for example 5-fold cross-validation. Classification as well as regression is supported.
The measure that should be optimized can be chosen from the list of measures in mlr: https://mlr-org.github.io/mlr/articles/measures.html
The package is mainly based on ranger, mlrMBO and mlr.
The package is also described in an arXiv-Paper: https://arxiv.org/abs/1804.03515
You can see a benchmark for classification in the paper.
Moreover, for regression I compared three different tuning implementations (tuneRanger, autoxgboost and liquidSVM on 29 regression tasks in their default mode and the default of ranger. The results of the 5-fold cross-validation show the competitiveness of tuneRanger and can be seen in the following graphs:
A disadvantage is the long runtime (e.g. compared to liquidSVM), improvements could be made on this issue.
Code for the two benchmarks is available here and here.
Quickstart:
library(tuneRanger)
library(mlr)
# A mlr task has to be created in order to use the package
# We make an mlr task with the iris dataset here
# (Classification task with makeClassifTask, Regression Task with makeRegrTask)
iris.task = makeClassifTask(data = iris, target = "Species")
# Rough Estimation of the Tuning time
estimateTimeTuneRanger(iris.task)
# Tuning process (takes around 1 minute); Tuning measure is the multiclass brier score
res = tuneRanger(iris.task, measure = list(multiclass.brier), num.trees = 1000,
num.threads = 2, iters = 70)
# Mean of best 5 % of the results
res
# Model with the new tuned hyperparameters
res$model
# Restart after failing in one of the iterations:
res = restartTuneRanger("./optpath.RData", iris.task, measure = list(multiclass.brier))Please cite the paper, if you use the package:
@ARTICLE{tuneRanger,
author = {Probst, Philipp and Wright, Marvin and Boulesteix, Anne-Laure},
title = {Hyperparameters and Tuning Strategies for Random Forest},
journal = {ArXiv preprint arXiv:1804.03515},
archivePrefix = "arXiv",
eprint = {1804.03515},
primaryClass = "stat.ML",
keywords = {Statistics - Machine Learning, Computer Science - Learning},
year = 2018,
url = {https://arxiv.org/abs/1804.03515}
}These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.