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version 0.4.17

NEWS.md setup

• Version 0.5.0 2022-MM-DD . Add tag $feature_tag_n. . Features ordered by the listed order in features argument. . Add time duration tdur as a column at voice::tag function return. . Solve acf feature extraction at voice::extract_features. . Error in dplyr::bind_cols(): ! Can’t recycle ..1 (size 2396) to match ..4 (size 0). Run rlang::last_error() to see where the error occurred. . Solve @ voice::diarize.R FileNotFoundError: [Errno 2] No such file or directory: ‘/home/fz/.cache/torch/hub/pyannote_pyannote-audio_master/hubconf.py’ . Change message @ voice::tag: FROM ‘Warning: no non-missing arguments to min; returning InfError in features.list.temp$f0[[j]] : subscript out of bounds’ TO ‘File does not exist!’

• Version 0.4.21 2023-04-20 . Dropped the section 3 from voicegnette_R after Prof Brian Ripley’s email: Dear maintainer, Please see the problems shown on https://cran.r-project.org/web/checks/check_results_voice.html. Please correct before 2023-05-03 to safely retain your package on CRAN. The CRAN Team

• Version 0.4.20 2023-04-20 . filesRange and features switched. Now filesRange is in the 3rd and features in the 2nd positions in the argument vector. This change impacts the examples of interp_df.R, interp_mc.R, smooth_df.R, tag.R. . f0_praat, …, f8_praat implemented in extract_features.R. . pycall = '~/miniconda3/envs/pyvoice38/bin/python3.8' added as argument in extract_features.R. . formants set to fmt in extract_features.R. . windowShift set to 10 as default in extract_features.R and feat_summary.R. . extract_features_py.R deprecated. . voice::conv set to voice::interp at lines 45 and 50 of interp_mc.R. . Functions get_ removed from spltw.R. . More information given in voice::diarize documentation.

• Version 0.4.19 2023-04-06 . All documentation verified. . voice::conv set to voice::interp. . voice::conv_mc set to voice::interp_mc. . voice::conv_df set to voice::interp_df. . gender set to sex as argument of voice::extract_features. . gender set to sex as argument of voice::feat_summary. . gender set to sex as argument of voice::tag.

• Version 0.4.18 2023-04-05 . Added pycall argument to voice::extract_features_py. . References updated in voice::extract_features. . References updated in voice::extract_features_py. . F0 column inferred via voice::extract_features_py set to f0_praat. Line 39 of extract_f0.py, (df_f0_long['f0_praat']) and line 83 of extract_features_py.R (dplyr::select(id, file_name, interval, F0) %>%). . 1, column inferred via voice::extract_features_py set to f0_praat. . Column mhs set to f0_mhs in voice::extract_features. . Lean call to voice::extract_features: features = c('f0', 'formants', # Pitch and formants 'df', 'pf', # Formant dispersion and position 'rf', 'rpf', 'rcf', # Formant removals 'rfc', # (R)e(F)lection (C)oefficients 'mfcc'), # (M)el (Frequency (C)epstral (C)oefficients . RPf - Formant Position Removal by Zabala (2023) disentangled from Pf by Puts et al (2012) in voice::extract_features. . voice::diarize calls directly pyannote.audio via reticulate using a token. The download and call of libs.py and diarization-pyannote.py is no longer needed. . Reconnect to Github after 5 months.

• Version 0.4.17 2023-03-14 . voice now depends of R (>= 4.0.0), not R (>= 4.1.0) in order to allow Kaggle installation. . Deprecated poetry (sent to draft/poetry.R), created R/diarize instead. . Deprecated data/id_path.rda and man/id_path.Rd (sent to draft/id_path.rda and draft/id_path.Rd), created /data/mozilla_id_path.rda and man/mozilla_id_path.Rd instead. . Updated .Rbuildignore: ^.*.Rproj$ ^.Rproj.user$ ^cran-comments.md$ ^CRAN-SUBMISSION$ ^requirements.txt$ ^draft$ ^revdep$ . rstudio.com became posit.co. . Monterey became Ventura. . voice::diarize exported to NAMESPACE.

• Version 0.4.16 2022-09-14 . Allow R/conv_df.R to use unitary features argument.

• Version 0.4.15 2022-09-07 . Removed duplicated ‘must’ from autoDir parameter documentation at poetry.R . Updated vignettes/voicegnette_R.Rmd. . Set verbose = FALSE:

  • R/feat_summary.R
  • R/tag.R . Set to.data.frame = to.data.frame to cn.li call @ R/conv_df.R.

• Version 0.4.14 2022-09-02 As suggested by Benjamin Altmann: . Added @return to R/write_list.R. This implies adding a \value field to the corresponding .Rd file.

• Version 0.4.12 As suggested by Benjamin Altmann:
  . Reduced the length of the title to 64 characters, less than 65. In DESCRIPTION:
  nchar('Tools for Voice Analysis, Speaker Recognition and Mood Inference') . Package names, software names and API names written in single quotes in title and description.

• enrich_rttm.R: ‘’

• extract_features_py.R: ‘Python’s’ ‘Parselmouth’

• feat_summary.R: ‘voice::extract_features’

• poetry.R: ‘Python’s’ ‘pyannote-audio’

• DESCRIPTION: ‘R’ and ‘Python’ . Reference “Zabala, F.J. (2022) to appear in…” removed from

• extract_features.R

• feat_summary.R

• tag.R . Added @return to the following .R files regarding exported methods and explaining the functions results in the documentation. This implies adding a \value field to the corresponding .Rd files.

• R/audio_time.R

• R/enrich_rttm.R

• R/extract_features.R

• R/extract_features_py.R

• R/feat_summary.R

• R/get_bit.R

• R/get_dur.R

• R/get_left.R

• R/get_right.R

• R/get_samp.rate.R

• R/get_tbeg.R

• R/get_tdur.R

• R/is_mono.R

• R/notes.R

• R/poetry.R

• R/read_rttm.R

• R/splitw.R

• R/tag.R . Functions moved to draft directory:

• draft/chords.R

• draft/has_audio.R

• draft/id_file.R

• draft/is_can.R

• draft/is_ext.R

• draft/memory.R

• draft/na_filter.R

• draft/notes_summary.R

• draft/plot_note.R

• draft/plot_q.R

• draft/rowProp.R

• draft/rp.R

• draft/spoken_time.R . Functions in which \dontrun was replaced with or simply added \donttest:

• R/conv_df.R

• R/conv_mc.R

• R/enrich_rttm.R . In order to easily suppress information messages to the console, argument ‘verbose’ was set to as default @ R/extract_features.R . . tempdir() used @:

• R/enrich_rttm.R

• R/get_tbeg.R

• R/get_tdur.R

• R/poetry.R

• R/read_rttm.R

• R/splitw.R . \url added to references at

• R/enrich_rttm.R

• R/notes_freq.R

• R/notes.R

• R/read_rttm.R

• Version 0.4.11 2022-08-28 . In order to reduce the examples running time:

  • The following variables were omitted from conv_df.R example: ‘zcr’,‘mhs’,‘rms’,‘gain’,‘rfc’,‘ac’,‘cep’,‘dft’,‘css’,‘lps’,‘mfcc’.
  • \dontrun added to conv_mc.R.
  • \dontrun added to na_filter.R.

• Version 0.4.10 2022-08-28 . “You also have to remove the licences file which is part of R anyway. Best, Uwe Ligges”. License file removed by unlink('LICENSE') command. . License set to the original ‘GPL-3’ (instead of ‘MIT + file LICENSE’, ‘MIT’ or ‘GPL-3 + file LICENSE’) @ DESCRIPTION file.

• Version 0.4.9 2022-08-26 . License set to ‘MIT + file LICENSE’ (instead of either ‘MIT’, ‘GPL-3’ or ‘GPL-3 + file LICENSE’) @ DESCRIPTION file.

• Version 0.4.8 2022-08-26 . License set to ‘MIT’ (instead of either ‘GPL-3’ or ‘GPL-3 + file LICENSE’) @ DESCRIPTION file.

• Version 0.4.7 2022-08-26 . License set to ‘GPL-3’ (instead of ‘GPL-3 + file LICENSE’) @ DESCRIPTION file. As I remove it, a new note was presented:
  ‘File LICENSE is not mentioned in the DESCRIPTION file.’

• Version 0.4.6 2022-08-25 . Now depends: R (>= 4.1.0) in order to install on Windows.

• Version 0.4.5 2022-08-24 . Following Uwe Ligges’ list. . URL: https://www.apple.com/macos/big-sur/ moved to https://www.apple.com/macos/monterey/ @ README.md. . Using fully specified URLs starting with the protocol for https://www.xquartz.org/ @ README.md. . Changed http –> https for https://ffmpeg.org/ and https://www.fon.hum.uva.nl/praat/ @ README.md. Note http://filipezabala.com/ and http://www.rob-mcculloch.org/ are non-secure protocols. . The canonical URL of the CRAN page was updated for https://cran.r-project.org/package=wrassp, https://cran.r-project.org/package=tuneR, https://cran.r-project.org/package=seewave and https://cran.r-project.org/package=gm. . Can’t find where to omit “+ file LICENSE”, the DESCRIPTION file requires it.

• Version 0.4.4 2022-08-23 . The list.txt file was generated by write_list.R function. \dontrun environment was applied to solve the problem at devtools::check.

• Version 0.4.3 2022-07-18 . Replaced \url by at 10.1121/1.421048 and 10.1098/rspb.2011.0829 @ extract_features.R. . Where is list.txt?????

• Version 0.4.2 2022-07-18 . Removed “≈” U+2248 Almost Equal . Adjusted Maintainer and Authors@R (Zabala Filipe J.): Maintainer: ‘Zabala Filipe J. filipezabala@gmail.com’ Authors@R: ‘Zabala Filipe J. filipezabala@gmail.com’ . Where is list.txt?????

• Version 0.4.1 2022-07-18 . Many improvements after devtools::release(). . Where is list.txt?????

• Version 0.4.0 2022-07-17 . Many improvements after devtools::check(). . Where is list.txt?????

• Version 0.3.22 2022-07-15 . Update documentation @ extract_features.R.

• Version 0.3.21 2022-06-10 . Lost changes.

• Version 0.3.20 2022-05-30 . Corrected verbose = TRUE @ tag.R and @ feat_summary.R.

• Version 0.3.19 2022-05-30 . Added @ voice::extract_features in line 22: #’ @param verbose Logical. Should the running status be showed? . Verbose also added to feat_summary.R and tag.R. . feat_summary2 set to feat_summary in line 31 @ feat_summary.R.

• Version 0.3.18 2022-05-23 . Added dplyr::tibble in line 92 @ feat_summary.R.

• Version 0.3.17 2022-05-22 . Solved summarizing problem when wav_path was a directory (and not a file name) @ feat_summary.R.

• Version 0.3.16 2022-05-22 . Lost changes.

• Version 0.3.15 2022-05-21 . Updated feat_summary.R normalizing dirnames @ Media and @ Extended (full path) . Added extdata directory.

• Version 0.3.14 2022-05-07 . Lost changes.

• Version 0.3.13 2022-MM-DD . Set id_path.Rda to mozilla_id_path.Rda

• Version 0.3.12 2022-02-13 . Removed toLowerGroupBy @ feat_summary.R and tag.R.

• Version 0.3.11 2022-02-11 . Set check.mono and stereo2mono to FALSE @ extract_features.R, feat_summary.R and tag.R. . Added x <- dplyr::as_tibble(x) @ feat_summary.R.

• Version 0.3.10 2022-02-11 . Set wavFiles <- do.call(rbind, wavFiles) to wavFiles <- do.call(rbind, as.list(unlist(wavFiles))) @ extract_features.R.

• Version 0.3.9 2022-02-10 . Tidy up tag.R documentation, removing @param subj.id, @param media.id and @param subj.id.simplify. . Added @param wavPath in feat_summary.R and tag.R documentation. . Added @param wavPathName in feat_summary.R and tag.R documentation. . Normalized dirnames @ feat_summary.R

• Version 0.3.8 2022-02-09 . dplyr::vars @ feat_summary.R

• Version 0.3.7 2022-02-09 . Make Media and Extended datasets consistent in documentation. . extract_features.R . Drop ‘file_name_ext’ column @ output. . Add ‘wavPath’ as the third column @ extract_features.R output. . Admit directories or files in the main argument x. . feat_summary.R . path > wav_path, id_seq > slice_seq, id_seq_file > slice_seq_file . Added ‘groupBy’ argument . Check tag.R applied on Canonical data . tag.R . Create examples . Remove arguments subj.id, media.id and subj.id.simplify . Disable audio_time

• Version 0.3.6 2022-01-02 . Added @references Ardila et al (2019). . Added voice::plot_q.R, a plot_q[uality] function. . Imports magrittr at DESCRIPTION file.

• Version 0.3.5 2022-01-02 . Removed voice_ex1.rda, 7.5MB. . Deleted NAMESPACE.

• Version 0.3.4 2022-01-01 . id_path <- E %>% select(client_id:path) save(id_path, file = ‘~/Dropbox/D_Filipe_Zabala/pacotes/voice/data/id_path.rda’, compress = ‘xz’) voice::id_path

• Version 0.3.3 2022-01-01 . Eid <- E %>% select(client_id:path) save(Eid, file = ‘~/Dropbox/D_Filipe_Zabala/pacotes/voice/data/id_path.rda’, compress = TRUE) data(voice::id_path)

• Version 0.3.2 2021-12-15 . Harmonize voice::extract_features.R and voice::tag.R arguments.

• Version 0.3.1 2021-12-03 . extract_features2 set to voice::extract_features @ line 24 @ feat_summary.R.

• Version 0.3.0 2021-12-03 . Set argument ‘directory’ to ‘x’ @ extract_features.R. . Set features colnames to lowercase @ extract_features.R. . Added df, pf, rf, rcf and rpf as argument of ‘features’ @ extract_features.R. . Deprecate argument ‘extraFeatures’ @ extract_features.R and, feat_summary.R and tag.R. . Contemplate ZCR, RFC, AC, and MFCC (numbers) @ feat_summary.R.

• Version 0.2.11 2021-11-27 . Added dplyr::bind_cols to line 602 @ extract_features.R.

• Version 0.2.10 2021-11-27 . RCf <- paste0(‘RCf’, 2:8) . RPf <- paste0(‘RPf’, 2:8)

• Version 0.2.9 2021-11-27 . Formant Dispersion Removal (RDf) set to Formant Cumulated Removal (RCf), line 53 @ feat_summary.R . dat\(Dfn <- dat\)Fn-dat\(F1 set to dat\)Dfn <- (dat\(Fn-dat\)F1)/(n-1) @ Df - Formant Dispersion by Fitch (1997) @ extract_features.

• Version 0.2.8 2021-11-27 . Formant Dispersion Removal (RDf) set to Formant Cumulated Removal (RCf). . RCf set from i=1,…,8 to i=2,…,8.

• Version 0.2.7 2021-11-10 . Added suppressMessages to line 61 @ smooth_df.R. . Summary generalized to all features obtained from voice::extract_features @ voice::feat_summary.

• Version 0.2.6 2021-11-07 . Added ‘rule = 2’ to line 52 @ conv.R.

• Version 0.2.5 2021-10-25 . Added voice::audio_time to voice::tag. . New tag order @ voice::feat_summary: mean, sd, vc, median, iqr, mad.

• Version 0.2.4 2021-10-14 . Added tag_F0_iqr = IQR(F0, na.rm = TRUE) @ feat_summary.R. . Added tag_F0_mad = mad(F0, na.rm = TRUE) @ feat_summary.R.

• Version 0.2.3 2021-10-13 . Set x[,subj.id] <- as.character(cumsum(!duplicated(x[,subj.id]))) @ tag.R.

• Version 0.2.2 2021-10-13 . Added parameter subj.id.simplify and all voice::extract_features parameters @ tag.R.

• Version 0.2.1 2021-10-13 . tag.R incorporates parameter mc.cores = 1 and dropped i = 4. . set tag.R from feat_summary2 to feat_summary at line 26. . feat_summary.R running voice::extract_features instead of extract_features. . feat_summary.R return(M_summ) instead of return(M).

• Version 0.2.0 2021-10-13 . Added has_audio.R. . Added audio_time.R. . Added spoken_time.R . Added feat_summary.R . Added tag.R.

• Version 0.1.1 2021-09-27 . audio_id.R set to id_file.R. audio_id(x, i = 5, drop_fn = FALSE) set to id_file(x, col = NULL, pattern = ‘[_.]’, i = 5, drop_col = FALSE) . id set to id_seq, id_file set to id_seq_file @ extract_features.R.

• Version 0.1.0 2021-09-26 . extract_features creates a general id and an id_file, counting by file. . ‘formant nested removal’ (RNf) set to ‘formant dispersion removal’ (RDf) by Zabala (2021/2022) @ extract_features.R and @ data.R. . Removed person(“Salum Jr.”, “Giovanni A.”, email = “gsalumjr@gmail.com”, role = “aut”). . splitw must show the elapsed time . drop_fn = TRUE set to drop_fn = FALSE

• Version 0.0.0.9047 2021-09-21 . audio_id.R function created. . Exported voice_ex1.rda and data.R. . toFile = F set to toFile = FALSE @ extract_features.R. . features.list[[i]] <- dplyr::tibble() set to lapply(features.list, dplyr::tibble) @ extract_features.R. . Added ‘formant dispersion’ (Df) by Fitch (1997) (doi:10.1121/1.421048) . Added ‘formant position’ (Pf) by Puts, Apicella & Cárdenas (2011) (https://doi.org/10.1098/rspb.2011.0829) . Added ‘formant removal’ (Rf) by Zabala (2021/2022) @ extract_features.R. . Added ‘formant nested removal’ (RNf) by Zabala (2021/2022) @ extract_features.R. . Added ‘formant position removal’ (RPf) by Zabala (2021/2022) @ extract_features.R.

• Version 0.0.0.9046 2021-09-15 . Added .name_repair = ‘unique’ to tibble::as_tibble @ smooth_df.R. This solved the Warning: The x argument of as_tibble.matrix() must have unique column names if .name_repair is omitted as of tibble 2.0.0. Using compatibility .name_repair.

• Version 0.0.0.9045 2021-09-15 . names(rttm) <- basename(rttmFiles), or file/base names inserted as names in list @ read_rttm.R. . Added columns ~black and ~Black to notes_freq.R. . Added method == ‘black’ and method == ‘Black’ @ notes.R. . Added distance <- diff(freq) @ notes.R. . method set to measure @ notes.R. . frequency set to freq @ notes_freq.R. . New col order @ notes_freq.R: freq, spn.lo, spn.hi, spn, midi, black, Black, wavelength . as_tibble set to tibble::as_tibble @ smooth_df.R. . xs_li set to snum_li @ smooth_df.R. . xs_df set to snum_df @ smooth_df.R. . xs_final set to xs @ smooth_df.R. . Ordered Imports: dplyr, e1071, ellipse, ggfortify, ggplot2, R.utils, RColorBrewer, reticulate, seewave, tibble, tidyr, tuneR, VIM, wrassp, zoo

• Version 0.0.0.9044 2021-09-12 . Parameters fromWav, fromRttm admits either file or directory @ splitw.R.

• Version 0.0.0.9043 2021-09-12 . Added parameter as.tibble = TRUE @ enrich_rttm.R.

• Version 0.0.0.9042 2021-09-12 . Changed column name from ‘id.split’ to ‘id_split @ enrich_rttm.R. . is.num <- unlist(lapply(x, class)) == ’numeric’ changed to is.num <- sapply(x, class) %in% c(‘integer’, ‘numeric’) @ conv_df. . Added smooth_df.R. . Drop by.filter parameter @ conv_df.R. . id and colnum shifted @ conv_df.R documentation. . Added parameter as.tibble = TRUE @ enrich_rttm.R.

• Version 0.0.0.9041 2021-09-10 . Changed mc.cores = parallel::detectCores() to mc.cores = 1 @ conv_df.R, conv_mc.R, extract_features.R. . Parameter silence.gap set from 0.4 to 0.5 (universal standard) @ splitw.R, enrich_rttm.R. . Changed column name from ‘id.min.time’ to ‘id.split’ @ enrich_rttm.R.

• Version 0.0.0.17 . Solved the recursive issue in diarization-pyannote.py (by Sola):

import os import re

file_list = [] for root, dirs, files in os.walk(‘./’): file_list = [f for f in files if re.findall(r’[.]wav’, f, re.IGNORECASE)] break

print(file_list)

. os.listdir? . os.walk(pathfrom, level=1)? . os.walk(pathfrom, recursive = FALSE)? . https://stackoverflow.com/questions/229186/os-walk-without-digging-into-directories-below

• Version 0.0.0.1 2018-11-21 08:30:00 GMT-3

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