CRAN Package Check Results for Maintainer ‘Beniamino Green <beniamino.green at yale.edu>’

Last updated on 2026-01-17 03:52:24 CET.

Package	ERROR	OK
zoomerjoin	3	10

Package zoomerjoin

Current CRAN status: ERROR: 3, OK: 10

Additional issues

noSuggests

Version: 0.2.1
Check: tests
Result: ERROR Running ‘testthat.R’ [20s/15s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(zoomerjoin) _R_CHECK_LIMIT_CORES_ is set to TRUE. Running on 2 cores > > test_check("zoomerjoin") NULL NULL Loading required package: babynames Loading required package: stringdist Saving _problems/test-test_logical_lsh_join-104.R Saving _problems/test-test_logical_lsh_join-121.R Saving _problems/test-test_logical_lsh_join-135.R Saving _problems/test-test_logical_lsh_join-256.R [ FAIL 4 | WARN 1 | SKIP 2 | PASS 226 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • On CRAN (2): 'test-curves.R:1:1', 'test-curves.R:9:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test_logical_lsh_join.R:103:7'): jaccard_inner_join gives same results as stringdist_inner_join ── Error in `stringdist_inner_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_inner_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:99:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:103:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:120:7'): jaccard_left_join gives same results as stringdist_inner_join ── Error in `stringdist_left_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_left_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:116:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:120:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:134:7'): jaccard_right_join gives same results as stringdist_inner_join ── Error in `stringdist_right_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_right_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:130:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:134:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:255:7'): jaccard_inner_join gives same results as stringdist_inner_join ── Error in `stringdist_inner_join(names_df, misspelled_name_df, method = "hamming", max_dist = 3)`: could not find function "stringdist_inner_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:251:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:255:7 4. └─dplyr::arrange(., id_1, id_2) [ FAIL 4 | WARN 1 | SKIP 2 | PASS 226 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘benchmarks.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘benchmarks.Rmd’ --- re-building ‘guided_tour.Rmd’ using rmarkdown Quitting from guided_tour.Rmd:44-54 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `library()`: ! there is no package called 'fuzzyjoin' --- Backtrace: ▆ 1. └─base::library(fuzzyjoin) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'guided_tour.Rmd' failed with diagnostics: there is no package called 'fuzzyjoin' --- failed re-building ‘guided_tour.Rmd’ --- re-building ‘matching_vectors.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘matching_vectors.Rmd’ SUMMARY: processing the following file failed: ‘guided_tour.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.1
Check: tests
Result: ERROR Running ‘testthat.R’ [67s/60s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(zoomerjoin) _R_CHECK_LIMIT_CORES_ is set to TRUE. Running on 2 cores > > test_check("zoomerjoin") NULL NULL Loading required package: babynames Loading required package: stringdist Saving _problems/test-test_logical_lsh_join-104.R Saving _problems/test-test_logical_lsh_join-121.R Saving _problems/test-test_logical_lsh_join-135.R Saving _problems/test-test_logical_lsh_join-256.R [ FAIL 4 | WARN 1 | SKIP 2 | PASS 226 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • On CRAN (2): 'test-curves.R:1:1', 'test-curves.R:9:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test_logical_lsh_join.R:103:7'): jaccard_inner_join gives same results as stringdist_inner_join ── Error in `stringdist_inner_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_inner_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:99:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:103:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:120:7'): jaccard_left_join gives same results as stringdist_inner_join ── Error in `stringdist_left_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_left_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:116:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:120:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:134:7'): jaccard_right_join gives same results as stringdist_inner_join ── Error in `stringdist_right_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_right_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:130:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:134:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:255:7'): jaccard_inner_join gives same results as stringdist_inner_join ── Error in `stringdist_inner_join(names_df, misspelled_name_df, method = "hamming", max_dist = 3)`: could not find function "stringdist_inner_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:251:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:255:7 4. └─dplyr::arrange(., id_1, id_2) [ FAIL 4 | WARN 1 | SKIP 2 | PASS 226 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘benchmarks.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘benchmarks.Rmd’ --- re-building ‘guided_tour.Rmd’ using rmarkdown Quitting from guided_tour.Rmd:44-54 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `library()`: ! there is no package called 'fuzzyjoin' --- Backtrace: ▆ 1. └─base::library(fuzzyjoin) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'guided_tour.Rmd' failed with diagnostics: there is no package called 'fuzzyjoin' --- failed re-building ‘guided_tour.Rmd’ --- re-building ‘matching_vectors.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘matching_vectors.Rmd’ SUMMARY: processing the following file failed: ‘guided_tour.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.2.1
Check: tests
Result: ERROR Running ‘testthat.R’ [66s/102s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(zoomerjoin) _R_CHECK_LIMIT_CORES_ is set to TRUE. Running on 2 cores > > test_check("zoomerjoin") NULL NULL Loading required package: babynames Loading required package: stringdist Saving _problems/test-test_logical_lsh_join-104.R Saving _problems/test-test_logical_lsh_join-121.R Saving _problems/test-test_logical_lsh_join-135.R Saving _problems/test-test_logical_lsh_join-256.R [ FAIL 4 | WARN 1 | SKIP 2 | PASS 226 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • On CRAN (2): 'test-curves.R:1:1', 'test-curves.R:9:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test_logical_lsh_join.R:103:7'): jaccard_inner_join gives same results as stringdist_inner_join ── Error in `stringdist_inner_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_inner_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:99:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:103:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:120:7'): jaccard_left_join gives same results as stringdist_inner_join ── Error in `stringdist_left_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_left_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:116:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:120:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:134:7'): jaccard_right_join gives same results as stringdist_inner_join ── Error in `stringdist_right_join(names_df, misspelled_name_df, method = "jaccard", max_dist = 0.1)`: could not find function "stringdist_right_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:130:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:134:7 4. └─dplyr::arrange(., id_1, id_2) ── Error ('test-test_logical_lsh_join.R:255:7'): jaccard_inner_join gives same results as stringdist_inner_join ── Error in `stringdist_inner_join(names_df, misspelled_name_df, method = "hamming", max_dist = 3)`: could not find function "stringdist_inner_join" Backtrace: ▆ 1. ├─testthat::capture_messages(...) at test-test_logical_lsh_join.R:251:5 2. │ └─base::withCallingHandlers(...) 3. ├─... %>% arrange(id_1, id_2) at test-test_logical_lsh_join.R:255:7 4. └─dplyr::arrange(., id_1, id_2) [ FAIL 4 | WARN 1 | SKIP 2 | PASS 226 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc