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ct: Integrated Camera-Trap Data Management and Analysis

An integrated, tidyverse-friendly workflow for camera trap data in wildlife monitoring and ecological research. Reads and edits media metadata, filters independent detections, analyses activity patterns and species diversity, and estimates species density or abundance with several methods, including the random encounter model, camera-trap distance sampling, time-to-event, space-to-event, and the random encounter and staying-time model (see Rowcliffe et al. (2008) <doi:10.1111/j.1365-2664.2008.01473.x>, Howe et al. (2017) <doi:10.1111/2041-210X.12790>, Nakashima et al. (2018) <doi:10.1111/1365-2664.13059>, and Moeller et al. (2018) <doi:10.1002/ecs2.2331>).

Version: 0.4.0
Depends: R (≥ 3.5)
Imports: activity (≥ 1.3.4), dplyr (≥ 1.1.4), camtrapdp, cli (≥ 3.6.3), Distance (≥ 2.0.0), ggplot2 (≥ 3.5.2), lubridate, magrittr (≥ 2.0.3), methods, overlap (≥ 0.3.9), rlang (≥ 1.1.5), sbd (≥ 0.1.0), sf (≥ 1.0-19), terra (≥ 1.8-29), tibble, tidyr (≥ 1.3.1), tidyselect, Rcpp (≥ 1.0.14)
LinkingTo: Rcpp
Suggests: assertr, iNEXT (≥ 3.0.2), httr2, kableExtra (≥ 1.4.0), knitr (≥ 1.50), leaflet (≥ 2.2.2), MASS, MCMCvis, msm, nimble, coda, progress, rmarkdown, shiny (≥ 1.10.0), testthat (≥ 3.0.0), vegan (≥ 2.6-6.1), xml2
Published: 2026-07-16
DOI: 10.32614/CRAN.package.ct (may not be active yet)
Author: Stanislas Mahussi Gandaho ORCID iD [aut, cre], Pablo Palencia ORCID iD [ctb, rev], R Consortium [fnd]
Maintainer: Stanislas Mahussi Gandaho <stangandaho at gmail.com>
BugReports: https://github.com/stangandaho/ct/issues
License: MIT + file LICENSE
URL: https://stangandaho.github.io/ct/
NeedsCompilation: yes
Materials: README, NEWS
CRAN checks: ct results

Documentation:

Reference manual: ct.html , ct.pdf

Downloads:

Package source: ct_0.4.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): ct_0.4.0.tgz, r-oldrel (arm64): not available, r-release (x86_64): ct_0.4.0.tgz, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ct to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.