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prioritylasso: Analyzing Multiple Omics Data with an Offset Approach

Fits successive Lasso models for several blocks of (omics) data with different priorities and takes the predicted values as an offset for the next block. Also offers options to deal with block-wise missingness in multi-omics data.

Version: 0.3.1
Depends: R (≥ 3.5.0)
Imports: survival, glmnet, utils, checkmate
Suggests: testthat, knitr, rmarkdown, pROC, bookdown, ipflasso
Published: 2023-04-10
DOI: 10.32614/CRAN.package.prioritylasso
Author: Simon Klau, Roman Hornung, Alina Bauer, Jonas Hagenberg
Maintainer: Roman Hornung <hornung at ibe.med.uni-muenchen.de>
License: GPL-2
NeedsCompilation: no
Materials: README NEWS
In views: Omics
CRAN checks: prioritylasso results

Documentation:

Reference manual: prioritylasso.pdf
Vignettes: How prioritylasso handles blockwise missing data
prioritylasso Vignette

Downloads:

Package source: prioritylasso_0.3.1.tar.gz
Windows binaries: r-devel: prioritylasso_0.3.1.zip, r-release: prioritylasso_0.3.1.zip, r-oldrel: prioritylasso_0.3.1.zip
macOS binaries: r-release (arm64): prioritylasso_0.3.1.tgz, r-oldrel (arm64): prioritylasso_0.3.1.tgz, r-release (x86_64): prioritylasso_0.3.1.tgz, r-oldrel (x86_64): prioritylasso_0.3.1.tgz
Old sources: prioritylasso archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.