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remaCor: Random Effects Meta-Analysis for Correlated Test Statistics

Meta-analysis is widely used to summarize estimated effects sizes across multiple statistical tests. Standard fixed and random effect meta-analysis methods assume that the estimated of the effect sizes are statistically independent. Here we relax this assumption and enable meta-analysis when the correlation matrix between effect size estimates is known. Fixed effect meta-analysis uses the method of Lin and Sullivan (2009) <doi:10.1016/j.ajhg.2009.11.001>, and random effects meta-analysis uses the method of Han, et al. <doi:10.1093/hmg/ddw049>.

Version: 0.0.18
Depends: R (≥ 3.6.0), ggplot2, methods
Imports: mvtnorm, grid, reshape2, compiler, Rcpp, EnvStats, Rdpack, stats
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, RUnit, clusterGeneration, metafor
Published: 2024-02-08
DOI: 10.32614/CRAN.package.remaCor
Author: Gabriel Hoffman ORCID iD [aut, cre]
Maintainer: Gabriel Hoffman <gabriel.hoffman at mssm.edu>
BugReports: https://github.com/DiseaseNeurogenomics/remaCor/issues
License: Artistic-2.0
URL: https://diseaseneurogenomics.github.io/remaCor/
NeedsCompilation: yes
Citation: remaCor citation info
Materials: README NEWS
In views: MetaAnalysis
CRAN checks: remaCor results

Documentation:

Reference manual: remaCor.pdf
Vignettes: remaCor: Random effects meta-analysis for correlated test statistics

Downloads:

Package source: remaCor_0.0.18.tar.gz
Windows binaries: r-devel: remaCor_0.0.18.zip, r-release: remaCor_0.0.18.zip, r-oldrel: remaCor_0.0.18.zip
macOS binaries: r-release (arm64): remaCor_0.0.18.tgz, r-oldrel (arm64): remaCor_0.0.18.tgz, r-release (x86_64): remaCor_0.0.18.tgz, r-oldrel (x86_64): remaCor_0.0.18.tgz
Old sources: remaCor archive

Reverse dependencies:

Reverse imports: dreamlet, variancePartition

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.