CRAN Package Check Results for Package TBRDist

Last updated on 2025-06-01 03:50:58 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 27.34 68.39 95.73 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.2 22.40 50.93 73.33 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.2 155.80 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.2 177.41 NOTE
r-devel-windows-x86_64 1.0.2 37.00 0.00 37.00 FAIL
r-patched-linux-x86_64 1.0.2 31.82 67.84 99.66 NOTE
r-release-linux-x86_64 1.0.2 29.57 67.67 97.24 NOTE
r-release-macos-arm64 1.0.2 72.00 NOTE
r-release-macos-x86_64 1.0.2 107.00 NOTE
r-release-windows-x86_64 1.0.2 34.00 114.00 148.00 NOTE
r-oldrel-macos-arm64 1.0.2 72.00 NOTE
r-oldrel-macos-x86_64 1.0.2 113.00 NOTE
r-oldrel-windows-x86_64 1.0.2 42.00 145.00 187.00 NOTE

Check Details

Version: 1.0.2
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Martin R. Smith <martin.smith@durham.ac.uk>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. The Description field contains using the algorithms of Whidden and Matsen (2017) <arxiv:1511.07529>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.2
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.2
Check: PDF version of manual
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > mafs <- capture.output(TBRDist(tree1, tree2, approximate = FALSE, + printMafs = TRUE)) > head(mafs) [1] "((0,1),(3,4),2); 5;" "((0,1),(3,4),2); 5;" "(0,1,2); (5,4,3);" [4] "(0,1,2); (3,5,4);" "(((0,1),2),4,5); 3;" "(((0,1),2),4,5); 3;" > > MAFInfo(tree1, tree2) [1] 4.556913 > MAFInfo(list(tree2, tree1), list(tree1, tree2)) [,1] [,2] [1,] 4.556913 6.714246 [2,] 6.714246 4.556913 > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 1.59 0.23 1.83 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-devel-windows-x86_64

Version: 1.0.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.