CRAN Package Check Results for Package aroma.affymetrix

Last updated on 2025-01-30 20:48:21 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	3.2.2	54.27	263.48	317.75	NOTE
r-devel-linux-x86_64-debian-gcc	3.2.2	36.47	160.45	196.92	NOTE
r-devel-linux-x86_64-fedora-clang	3.2.2			507.51	OK
r-devel-linux-x86_64-fedora-gcc	3.2.2			496.22	OK
r-devel-windows-x86_64	3.2.2	59.00	281.00	340.00	NOTE
r-patched-linux-x86_64	3.2.2	66.36	261.10	327.46	OK
r-release-linux-x86_64	3.2.2	45.88	258.61	304.49	OK
r-release-macos-arm64	3.2.2			100.00	NOTE
r-release-macos-x86_64	3.2.2			175.00	NOTE
r-release-windows-x86_64	3.2.2	55.00	288.00	343.00	NOTE
r-oldrel-macos-arm64	3.2.2			124.00	NOTE
r-oldrel-macos-x86_64	3.2.2			228.00	NOTE
r-oldrel-windows-x86_64	3.2.2	63.00	348.00	411.00	NOTE

Check Details

Version: 3.2.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: SmoothMultiarrayModel.Rd: ChromosomalModel, CopyNumberSegmentationModel byPath.AffymetrixFileSet.Rd: GenericDataFile calculateBaseline.ChipEffectSet.Rd: getAverageFile doCRMAv1.Rd: Verbose doCRMAv2.Rd: Verbose doFIRMA.Rd: Verbose doGCRMA.Rd: Verbose doRMA.Rd: Verbose justRMA.Rd: Verbose Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Packages unavailable to check Rd xrefs: ‘affxparser’, ‘oligo’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 3.2.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: SmoothMultiarrayModel.Rd: ChromosomalModel, CopyNumberSegmentationModel byPath.AffymetrixFileSet.Rd: GenericDataFile calculateBaseline.ChipEffectSet.Rd: getAverageFile doCRMAv1.Rd: Verbose doCRMAv2.Rd: Verbose doFIRMA.Rd: Verbose doGCRMA.Rd: Verbose doRMA.Rd: Verbose justRMA.Rd: Verbose Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Version: 3.2.2
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘AffymetrixDataTestFiles’ Flavors: r-release-macos-arm64, r-release-macos-x86_64

Version: 3.2.2
Check: installed package size
Result: NOTE installed size is 6.1Mb sub-directories of 1Mb or more: R 3.0Mb help 1.1Mb testScripts 1.1Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 3.2.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'affxparser', 'oligo', 'oligoClasses', 'pdInfoBuilder', 'AffymetrixDataTestFiles' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 3.2.2
Check: Rd cross-references
Result: NOTE Packages unavailable to check Rd xrefs: ‘affxparser’, ‘oligo’, ‘oligoClasses’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64