CRAN Package Check Results for Package gllvm

Last updated on 2026-07-04 17:51:35 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	2.0.11	491.50	715.01	1206.51	OK
r-devel-linux-x86_64-debian-gcc	2.0.11	463.60	505.11	968.71	OK
r-devel-linux-x86_64-fedora-clang	2.0.11	600.00	1842.57	2442.57	OK
r-devel-linux-x86_64-fedora-gcc	2.0.11	1020.00	1722.03	2742.03	OK
r-devel-windows-x86_64	2.0.11	456.00	753.00	1209.00	OK
r-patched-linux-x86_64	2.0.11	593.21	726.74	1319.95	ERROR
r-release-linux-x86_64	2.0.11				OK
r-release-macos-arm64	2.0.11	108.00	181.00	289.00	OK
r-release-macos-x86_64	2.0.11	327.00	886.00	1213.00	OK
r-release-windows-x86_64	2.0.11	471.00	749.00	1220.00	OK
r-oldrel-macos-arm64	2.0.11	103.00	181.00	284.00	OK
r-oldrel-macos-x86_64	2.0.11	318.00	806.00	1124.00	OK
r-oldrel-windows-x86_64	2.0.11	608.00	1045.00	1653.00	OK

Additional issues

noLD rchk

Check Details

Version: 2.0.11
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘vignette1.Rmd’ using rmarkdown --- finished re-building ‘vignette1.Rmd’ --- re-building ‘vignette10.Rmd’ using rmarkdown --- finished re-building ‘vignette10.Rmd’ --- re-building ‘vignette2.rmd’ using rmarkdown --- finished re-building ‘vignette2.rmd’ --- re-building ‘vignette3.rmd’ using rmarkdown Quitting from vignette3.rmd:147-152 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `FAstart()`: ! Calculating starting values failed. Maybe too many latent variables. Try smaller 'num.lv' value or change 'starting.val' to 'zero' or 'random'. --- Backtrace: ▆ 1. └─gllvm::gllvm(y = spider$abund, family = poisson(), num.lv = 2) 2. └─gllvm:::gllvm.iter(...) 3. ├─base::do.call(gllvm.TMB, args) 4. └─gllvm (local) `<fn>`(...) 5. └─gllvm:::start_values_gllvm_TMB(...) 6. └─gllvm:::FAstart(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'vignette3.rmd' failed with diagnostics: Calculating starting values failed. Maybe too many latent variables. Try smaller 'num.lv' value or change 'starting.val' to 'zero' or 'random'. --- failed re-building ‘vignette3.rmd’ --- re-building ‘vignette4.rmd’ using rmarkdown --- finished re-building ‘vignette4.rmd’ --- re-building ‘vignette5.Rmd’ using rmarkdown --- finished re-building ‘vignette5.Rmd’ --- re-building ‘vignette6.Rmd’ using rmarkdown --- finished re-building ‘vignette6.Rmd’ --- re-building ‘vignette7.Rmd’ using rmarkdown --- finished re-building ‘vignette7.Rmd’ --- re-building ‘vignette8.Rmd’ using rmarkdown --- finished re-building ‘vignette8.Rmd’ --- re-building ‘vignette9.Rmd’ using rmarkdown --- finished re-building ‘vignette9.Rmd’ SUMMARY: processing the following file failed: ‘vignette3.rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64