CRAN Package Check Results for Maintainer ‘Yaoxiang Li <liyaoxiang at outlook.com>’

Last updated on 2025-02-16 08:51:33 CET.

Package	ERROR	NOTE	OK
cmmr	1	2	12
ggpca			15
ggvolcano			15
medrxivr	1	6	8
omicsTools			15
ShinyLink			15

Package cmmr

Current CRAN status: ERROR: 1, NOTE: 2, OK: 12

Version: 1.0.3
Check: whether package can be installed
Result: ERROR Installation failed. Flavor: r-oldrel-macos-arm64

Version: 0.1.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package ggpca

Current CRAN status: OK: 15

Package ggvolcano

Current CRAN status: OK: 15

Package medrxivr

Current CRAN status: ERROR: 1, NOTE: 6, OK: 8

Version: 0.1.1
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘mx_syntax.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64, r-devel-windows-x86_64

Version: 0.1.1
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [70s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(medrxivr) > > test_check("medrxivr") [ FAIL 1 | WARN 3 | SKIP 14 | PASS 18 ] ══ Skipped tests (14) ══════════════════════════════════════════════════════════ • On CRAN (14): 'test-api.R:2:3', 'test-api.R:31:3', 'test-api.R:44:3', 'test-api.R:51:3', 'test-crosscheck.R:2:3', 'test-download.R:2:3', 'test-download.R:16:3', 'test-download.R:22:3', 'test-download.R:28:3', 'test-download.R:44:3', 'test-export.R:13:3', 'test-export.R:19:3', 'test-helpers.R:2:3', 'test-helpers.R:16:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-search.R:7:1'): (code run outside of `test_that()`) ──────────── Error in `download.file(file, tmpFile, method = method, mode = "wb", quiet = !showProgress)`: download from 'https://raw.githubusercontent.com//mcguinlu/medrxivr-data/6c4056d2cccd6031d92ee4269b1785c6ec4d555b/snapshot.csv' failed Backtrace: ▆ 1. └─medrxivr::mx_snapshot("6c4056d2cccd6031d92ee4269b1785c6ec4d555b") at test-search.R:7:1 2. ├─base::suppressMessages(...) 3. │ └─base::withCallingHandlers(...) 4. └─data.table::fread(...) 5. └─utils::download.file(...) [ FAIL 1 | WARN 3 | SKIP 14 | PASS 18 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Package omicsTools

Current CRAN status: OK: 15

Package ShinyLink

Current CRAN status: OK: 15