CRAN Package Check Results for Maintainer ‘Markus Jochim <markusjochim at phonetik.uni-muenchen.de>’

Last updated on 2025-09-04 05:51:29 CEST.

Package	ERROR	NOTE	OK
emuR	1	3	9
wrassp			13

Package emuR

Current CRAN status: ERROR: 1, NOTE: 3, OK: 9

Version: 2.5.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: get_trackdata.Rd: wrasspOutputInfos, tibble query.Rd: tibble requery_hier.Rd: tibble requery_seq.Rd: tibble serve.Rd: stopAllServers, httpuv Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-release-linux-x86_64, r-release-windows-x86_64

Version: 2.5.2
Check: tests
Result: ERROR Running ‘testthat.R’ [70s/117s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("emuR") Loading required package: emuR Attaching package: 'emuR' The following object is masked from 'package:base': norm [1] "INFO: No bundleList dir found in emuDB (path: /Volumes/Temp/tmp/RtmpTGMrz9/emuR_testthat/ae_emuDB/bundleLists)! Creating directory..." INFO: parsing 14 fms segments/events | | | 0% | |===== | 7% | |========== | 14% | |=============== | 21% | |==================== | 29% | |========================= | 36% | |============================== | 43% | |=================================== | 50% | |======================================== | 57% | |============================================= | 64% | |================================================== | 71% | |======================================================= | 79% | |============================================================ | 86% | |================================================================= | 93% | |======================================================================| 100% INFO: parsing 14 fms segments/events | | | 0% | |===== | 7% | |========== | 14% | |=============== | 21% | |==================== | 29% | |========================= | 36% | |============================== | 43% | |=================================== | 50% | |======================================== | 57% | |============================================= | 64% | |================================================== | 71% | |======================================================= | 79% | |============================================================ | 86% | |================================================================= | 93% | |======================================================================| 100% Read 16 items Read 12 records Read 24 items Read 20 records [ FAIL 8 | WARN 0 | SKIP 38 | PASS 830 ] ══ Skipped tests (38) ══════════════════════════════════════════════════════════ • On CRAN (7): 'test_emuR-autobuild.R:19:3', 'test_emuR-database.R:643:3', 'test_emuR-database.R:717:3', 'test_emuR-query.database.R:378:5', 'test_emuR-query.database.R:631:5', 'test_emuR-query.database.R:643:5', 'test_emuR-query.database.R:650:5' • empty test (29): 'test_emuR-autoproc_annots.R:13:1', 'test_emuR-autoproc_annots.R:53:1', 'test_emuR-convert_BPFCollection.R:516:1', 'test_emuR-convert_TextGridCollection.R:38:1', 'test_emuR-convert_TextGridCollection.R:124:1', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:49:3', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:19:1', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:98:3', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:102:3', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:69:1', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:147:3', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:151:3', 'test_emuR-database.DBconfig.EMUwebAppConfig.R:113:1', 'test_emuR-database.DBconfig.R:45:1', 'test_emuR-database.DBconfig.R:148:1', 'test_emuR-database.DBconfig.R:239:1', 'test_emuR-database.DBconfig.R:299:1', 'test_emuR-database.DBconfig.R:353:1', 'test_emuR-database.DBconfig.R:424:1', 'test_emuR-database.DBconfig.R:524:3', 'test_emuR-database.DBconfig.R:512:1', 'test_emuR-database.R:20:1', 'test_emuR-database.caching.R:22:1', 'test_emuR-database.files.R:55:3', 'test_emuR-database.files.R:9:1', 'test_emuR-emuRsegs.R:18:1', 'test_emuR-emuRtrackdata.R:17:1', 'test_emuR-export_TextGridCollection.R:17:1', 'test_emuR-query.database.R:17:1' • skipping as it takes 4 ever to test -> make sure to rerun on deploy (2): 'test_emuR-bas_webservices.R:12:13', 'test_emuR-bas_webservices.R:30:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_emuR-database.DBconfig.R:67:5'): add = (C)RUD ────────────────── Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize() Backtrace: ▆ 1. ├─emuR::add_ssffTrackDefinition(...) at test_emuR-database.DBconfig.R:67:5 2. │ └─emuR::list_files(emuDBhandle, fileExtension) 3. │ └─... %>% ... 4. ├─dplyr::mutate(...) 5. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern)) 6. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern)) 7. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$")) 8. ├─dplyr::mutate(...) 9. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl")) 10. ├─dplyr::filter(., endsWith(.data$session, "_ses")) 11. ├─dplyr::filter(., !is.na(.data$file)) 12. ├─dplyr::filter(., !is.na(.data$bundle)) 13. ├─dplyr::filter(., !is.na(.data$session)) 14. ├─tidyr::separate(...) 15. └─tidyr:::separate.data.frame(...) 16. └─tidyr:::str_separate(...) 17. └─tidyr:::str_split_fixed(...) 18. └─tidyr:::simplifyPieces(pieces, n, fill == "left") ── Failure ('test_emuR-database.DBconfig.R:84:5'): list = C(R)UD ─────────────── df$name not equal to c("dft", "fm", "newTrackName"). Lengths differ: 2 is not 3 ── Failure ('test_emuR-database.DBconfig.R:85:5'): list = C(R)UD ─────────────── df$columnName not equal to c("dft", "fm", "pitch"). Lengths differ: 2 is not 3 ── Failure ('test_emuR-database.DBconfig.R:86:5'): list = C(R)UD ─────────────── df$fileExtension not equal to c("dft", "fms", "pit"). Lengths differ: 2 is not 3 ── Error ('test_emuR-database.DBconfig.R:93:5'): remove = CRU(D) ─────────────── Error in `remove_ssffTrackDefinition(ae, name = "newTrackName", deleteFiles = TRUE)`: No ssffTrackDefinitions found with name: 'newTrackName' Backtrace: ▆ 1. └─emuR::remove_ssffTrackDefinition(ae, name = "newTrackName", deleteFiles = TRUE) at test_emuR-database.DBconfig.R:93:5 ── Error ('test_emuR-database.R:693:3'): rename bundles works correctly ──────── Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize() Backtrace: ▆ 1. ├─emuR::rename_bundles(db, bundles) at test_emuR-database.R:693:3 2. │ └─emuR::list_files(...) 3. │ └─... %>% ... 4. ├─dplyr::mutate(...) 5. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern)) 6. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern)) 7. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$")) 8. ├─dplyr::mutate(...) 9. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl")) 10. ├─dplyr::filter(., endsWith(.data$session, "_ses")) 11. ├─dplyr::filter(., !is.na(.data$file)) 12. ├─dplyr::filter(., !is.na(.data$bundle)) 13. ├─dplyr::filter(., !is.na(.data$session)) 14. ├─tidyr::separate(...) 15. └─tidyr:::separate.data.frame(...) 16. └─tidyr:::str_separate(...) 17. └─tidyr:::str_split_fixed(...) 18. └─tidyr:::simplifyPieces(pieces, n, fill == "left") ── Error ('test_emuR-database.files.R:87:7'): list = C(R)UD ──────────────────── Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize() Backtrace: ▆ 1. ├─emuR::list_files(ae) at test_emuR-database.files.R:87:7 2. │ └─... %>% ... 3. ├─dplyr::mutate(...) 4. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern)) 5. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern)) 6. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$")) 7. ├─dplyr::mutate(...) 8. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl")) 9. ├─dplyr::filter(., endsWith(.data$session, "_ses")) 10. ├─dplyr::filter(., !is.na(.data$file)) 11. ├─dplyr::filter(., !is.na(.data$bundle)) 12. ├─dplyr::filter(., !is.na(.data$session)) 13. ├─tidyr::separate(...) 14. └─tidyr:::separate.data.frame(...) 15. └─tidyr:::str_separate(...) 16. └─tidyr:::str_split_fixed(...) 17. └─tidyr:::simplifyPieces(pieces, n, fill == "left") ── Error ('test_emuR-get_trackdata.R:257:3'): non wrassp functions work ──────── Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize() Backtrace: ▆ 1. ├─emuR::list_files(ae, fileExtension = "fms") at test_emuR-get_trackdata.R:257:3 2. │ └─... %>% ... 3. ├─dplyr::mutate(...) 4. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern)) 5. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern)) 6. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$")) 7. ├─dplyr::mutate(...) 8. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl")) 9. ├─dplyr::filter(., endsWith(.data$session, "_ses")) 10. ├─dplyr::filter(., !is.na(.data$file)) 11. ├─dplyr::filter(., !is.na(.data$bundle)) 12. ├─dplyr::filter(., !is.na(.data$session)) 13. ├─tidyr::separate(...) 14. └─tidyr:::separate.data.frame(...) 15. └─tidyr:::str_separate(...) 16. └─tidyr:::str_split_fixed(...) 17. └─tidyr:::simplifyPieces(pieces, n, fill == "left") [ FAIL 8 | WARN 0 | SKIP 38 | PASS 830 ] Error: Test failures In addition: Warning message: call dbDisconnect() when finished working with a connection Execution halted Flavor: r-oldrel-macos-x86_64

Package wrassp

Current CRAN status: OK: 13