CRAN Package Check Results for Maintainer ‘Prabina Kumar Meher <meherprabin at yahoo.com>’

Last updated on 2025-03-20 16:52:16 CET.

Package	WARN	NOTE	OK
corrDNA			15
EncDNA	1	11	3
PredCRG	1	3	11

Package corrDNA

Current CRAN status: OK: 15

Package EncDNA

Current CRAN status: WARN: 1, NOTE: 11, OK: 3

Version: 1.0.2
Check: Rd files
Result: NOTE checkRd: (-1) droso.Rd:8: Lost braces; missing escapes or markup? 8 | The dataset contains 400 true donor sites, 400 false donor sites and 50 false sites as test set. Each sequence is of 40 nucleotides long. The conserved di-nucleotides GT are present at $21^{st}$ and $22^{nd}$ positions respectively. | ^ checkRd: (-1) droso.Rd:8: Lost braces; missing escapes or markup? 8 | The dataset contains 400 true donor sites, 400 false donor sites and 50 false sites as test set. Each sequence is of 40 nucleotides long. The conserved di-nucleotides GT are present at $21^{st}$ and $22^{nd}$ positions respectively. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.0.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: APR.Feature.Rd: DNAStringSet Bayes.Feature.Rd: DNAStringSet Density.Feature.Rd: DNAStringSet MM1.Feature.Rd: DNAStringSet MM2.Feature.Rd: DNAStringSet MN.Fdtf.Feature.Rd: DNAStringSet Maldoss.Feature.Rd: DNAStringSet PN.Fdtf.Feature.Rd: DNAStringSet POS.Feature.Rd: DNAStringSet Predoss.Feature.Rd: DNAStringSet SAE.Feature.Rd: DNAStringSet Sparse.Feature.Rd: DNAStringSet Trint.Dist.Feature.Rd: DNAStringSet WAM.Feature.Rd: DNAStringSet WMM.Feature.Rd: DNAStringSet Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 1.0.2
Check: whether package can be installed
Result: WARN Found the following significant warnings: Rd warning: APR.Feature.Rd:15: missing link ‘DNAStringSet’ Rd warning: APR.Feature.Rd:18: missing link ‘DNAStringSet’ Rd warning: APR.Feature.Rd:21: missing link ‘DNAStringSet’ Rd warning: Bayes.Feature.Rd:14: missing link ‘DNAStringSet’ Rd warning: Bayes.Feature.Rd:17: missing link ‘DNAStringSet’ Rd warning: Bayes.Feature.Rd:20: missing link ‘DNAStringSet’ Rd warning: Density.Feature.Rd:14: missing link ‘DNAStringSet’ Rd warning: MM1.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: MM1.Feature.Rd:19: missing link ‘DNAStringSet’ Rd warning: MM2.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: MM2.Feature.Rd:19: missing link ‘DNAStringSet’ Rd warning: MN.Fdtf.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: MN.Fdtf.Feature.Rd:19: missing link ‘DNAStringSet’ Rd warning: MN.Fdtf.Feature.Rd:22: missing link ‘DNAStringSet’ Rd warning: Maldoss.Feature.Rd:15: missing link ‘DNAStringSet’ Rd warning: Maldoss.Feature.Rd:18: missing link ‘DNAStringSet’ Rd warning: Maldoss.Feature.Rd:21: missing link ‘DNAStringSet’ Rd warning: PN.Fdtf.Feature.Rd:14: missing link ‘DNAStringSet’ Rd warning: PN.Fdtf.Feature.Rd:17: missing link ‘DNAStringSet’ Rd warning: PN.Fdtf.Feature.Rd:20: missing link ‘DNAStringSet’ Rd warning: POS.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: POS.Feature.Rd:19: missing link ‘DNAStringSet’ Rd warning: POS.Feature.Rd:22: missing link ‘DNAStringSet’ Rd warning: Predoss.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: Predoss.Feature.Rd:19: missing link ‘DNAStringSet’ Rd warning: Predoss.Feature.Rd:22: missing link ‘DNAStringSet’ Rd warning: SAE.Feature.Rd:15: missing link ‘DNAStringSet’ Rd warning: SAE.Feature.Rd:18: missing link ‘DNAStringSet’ Rd warning: SAE.Feature.Rd:21: missing link ‘DNAStringSet’ Rd warning: Sparse.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: Trint.Dist.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: WAM.Feature.Rd:15: missing link ‘DNAStringSet’ Rd warning: WAM.Feature.Rd:18: missing link ‘DNAStringSet’ Rd warning: WAM.Feature.Rd:21: missing link ‘DNAStringSet’ Rd warning: WMM.Feature.Rd:16: missing link ‘DNAStringSet’ Rd warning: WMM.Feature.Rd:19: missing link ‘DNAStringSet’ Rd warning: WMM.Feature.Rd:22: missing link ‘DNAStringSet’ Flavor: r-patched-linux-x86_64

Package PredCRG

Current CRAN status: WARN: 1, NOTE: 3, OK: 11

Version: 1.0.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: PredCRG.Rd: AAStringSet, readAAStringSet PredCRG_Enc.Rd: AAStringSet, readAAStringSet PredCRG_data.Rd: AAStringSet, readAAStringSet PredCRG_training.Rd: AAStringSet, readAAStringSet, ksvm Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 1.0.2
Check: whether package can be installed
Result: WARN Found the following significant warnings: Rd warning: PredCRG.Rd:15: missing link ‘AAStringSet’ Rd warning: PredCRG.Rd:15: missing link ‘readAAStringSet’ Rd warning: PredCRG_Enc.Rd:15: missing link ‘AAStringSet’ Rd warning: PredCRG_Enc.Rd:19: missing link ‘AAStringSet’ Rd warning: PredCRG_Enc.Rd:19: missing link ‘readAAStringSet’ Rd warning: PredCRG_data.Rd:12: missing link ‘AAStringSet’ Rd warning: PredCRG_data.Rd:12: missing link ‘readAAStringSet’ Rd warning: PredCRG_training.Rd:16: missing link ‘AAStringSet’ Rd warning: PredCRG_training.Rd:19: missing link ‘AAStringSet’ Rd warning: PredCRG_training.Rd:27: missing link ‘AAStringSet’ Rd warning: PredCRG_training.Rd:27: missing link ‘readAAStringSet’ Rd warning: PredCRG_training.Rd:30: missing link ‘ksvm’ Flavor: r-patched-linux-x86_64