CRAN Package Check Results for Maintainer ‘Martin Olivier <olivier.martin at inrae.fr>’

Last updated on 2025-03-11 14:55:57 CET.

Package	ERROR	NOTE	OK
siland	2	10	3

Package siland

Current CRAN status: ERROR: 2, NOTE: 10, OK: 3

Version: 3.0.2
Check: Rd files
Result: NOTE checkRd: (-1) siland.Rd:64: Lost braces; missing escapes or markup? 64 | \item x_{l,i}, local variable l, | ^ checkRd: (-1) siland.Rd:70: Lost braces; missing escapes or markup? 70 | \item d_{r,i} the distance between the center of pixel r and the observation at site i. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 3.0.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘siland.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-5-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 189382 bytes Input file size = 189736 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116317 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116317 Output IDAT size = 116317 bytes (73065 bytes decrease) Output file size = 116395 bytes (73341 bytes = 38.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-9-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 21197 bytes Input file size = 21299 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16939 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16939 Output IDAT size = 16939 bytes (4258 bytes decrease) Output file size = 17017 bytes (4282 bytes = 20.10% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-11-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 74002 bytes Input file size = 74188 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66918 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66918 Output IDAT size = 66918 bytes (7084 bytes decrease) Output file size = 66996 bytes (7192 bytes = 9.69% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-13-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 21690 bytes Input file size = 21792 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17387 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17387 Output IDAT size = 17387 bytes (4303 bytes decrease) Output file size = 17465 bytes (4327 bytes = 19.86% decrease) Quitting from lines 161-162 [unnamed-chunk-14] (siland.Rmd) Error: processing vignette 'siland.Rmd' failed with diagnostics: function cannot be evaluated at initial parameters --- failed re-building ‘siland.Rmd’ SUMMARY: processing the following file failed: ‘siland.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.0.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘siland.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-5-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 189382 bytes Input file size = 189736 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116317 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116317 Output IDAT size = 116317 bytes (73065 bytes decrease) Output file size = 116395 bytes (73341 bytes = 38.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-9-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 21197 bytes Input file size = 21299 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16939 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16939 Output IDAT size = 16939 bytes (4258 bytes decrease) Output file size = 17017 bytes (4282 bytes = 20.10% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-11-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 74002 bytes Input file size = 74188 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66918 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66918 Output IDAT size = 66918 bytes (7084 bytes decrease) Output file size = 66996 bytes (7192 bytes = 9.69% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/siland.Rcheck/vign_test/siland/vignettes/siland_files/figure-html/unnamed-chunk-13-1.png 672x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 21690 bytes Input file size = 21792 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17387 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17387 Output IDAT size = 17387 bytes (4303 bytes decrease) Output file size = 17465 bytes (4327 bytes = 19.86% decrease) Quitting from lines 161-162 [unnamed-chunk-14] (siland.Rmd) Error: processing vignette 'siland.Rmd' failed with diagnostics: function cannot be evaluated at initial parameters --- failed re-building ‘siland.Rmd’ SUMMARY: processing the following file failed: ‘siland.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc