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Set of functions to calculate Benthic Biotic Indices from composition data, obtained whether from morphotaxonomic inventories or sequencing data. Based on reference ecological weights publicly available for a set of commonly used marine biotic indices, such as AMBI (A Marine Biotic Index, Borja et al., 2000) <doi:10.1016/S0025-326X(00)00061-8> NSI (Norwegian Sensitivity Index) and ISI (Indicator Species Index) (Rygg 2013, <ISBN:978-82-577-6210-0>). It provides the ecological quality status of the samples based on each BBI as well as the normalized Ecological Quality Ratio.
| Version: | 0.3.0 |
| Depends: | vegan |
| Published: | 2018-10-17 |
| DOI: | 10.32614/CRAN.package.BBI |
| Author: | Tristan Cordier [aut, cre] |
| Maintainer: | Tristan Cordier <tristan.cordier at gmail.com> |
| BugReports: | https://github.com/trtcrd/BBI/issues |
| License: | AGPL-3 | file LICENSE |
| URL: | https://github.com/trtcrd/BBI |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | BBI results |
| Reference manual: | BBI.pdf |
| Package source: | BBI_0.3.0.tar.gz |
| Windows binaries: | r-devel: BBI_0.3.0.zip, r-release: BBI_0.3.0.zip, r-oldrel: BBI_0.3.0.zip |
| macOS binaries: | r-release (arm64): BBI_0.3.0.tgz, r-oldrel (arm64): BBI_0.3.0.tgz, r-release (x86_64): BBI_0.3.0.tgz, r-oldrel (x86_64): BBI_0.3.0.tgz |
| Old sources: | BBI archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.