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BiSEp: Toolkit to Identify Candidate Synthetic Lethality

Enables the user to infer potential synthetic lethal relationships by analysing relationships between bimodally distributed gene pairs in big gene expression datasets. Enables the user to visualise these candidate synthetic lethal relationships.

Version: 2.3
Depends: R (≥ 3.3.1)
Imports: AnnotationDbi, mclust, GO.db, org.Hs.eg.db, GOSemSim
Published: 2024-05-04
DOI: 10.32614/CRAN.package.BiSEp
Author: Mark Wappett
Maintainer: Mark Wappett <m.wappett at qub.ac.uk>
License: Artistic-2.0
NeedsCompilation: no
CRAN checks: BiSEp results

Documentation:

Reference manual: BiSEp.pdf
Vignettes: Synthetic Lethality: A User Guide

Downloads:

Package source: BiSEp_2.3.tar.gz
Windows binaries: r-devel: BiSEp_2.3.zip, r-release: BiSEp_2.3.zip, r-oldrel: BiSEp_2.3.zip
macOS binaries: r-release (arm64): BiSEp_2.3.tgz, r-oldrel (arm64): BiSEp_2.3.tgz, r-release (x86_64): BiSEp_2.3.tgz, r-oldrel (x86_64): BiSEp_2.3.tgz
Old sources: BiSEp archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.