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BoolNet: Construction, Simulation and Analysis of Boolean Networks

Functions to reconstruct, generate, and simulate synchronous, asynchronous, probabilistic, and temporal Boolean networks. Provides also functions to analyze and visualize attractors in Boolean networks <doi:10.1093/bioinformatics/btq124>.

Version: 2.1.9
Imports: igraph (≥ 0.6), XML
Published: 2023-10-02
DOI: 10.32614/CRAN.package.BoolNet
Author: Christoph Müssel [aut], Martin Hopfensitz [aut], Dao Zhou [aut], Hans A. Kestler [aut, cre], Armin Biere [ctb] (contributed PicoSAT code), Troy D. Hanson [ctb] (contributed uthash macros)
Maintainer: Hans A. Kestler <hans.kestler at uni-ulm.de>
License: Artistic-2.0
NeedsCompilation: yes
Citation: BoolNet citation info
Materials: NEWS
CRAN checks: BoolNet results

Documentation:

Reference manual: BoolNet.pdf
Vignettes: Detailed introduction to all major features of BoolNet

Downloads:

Package source: BoolNet_2.1.9.tar.gz
Windows binaries: r-devel: BoolNet_2.1.9.zip, r-release: BoolNet_2.1.9.zip, r-oldrel: BoolNet_2.1.9.zip
macOS binaries: r-release (arm64): BoolNet_2.1.9.tgz, r-oldrel (arm64): BoolNet_2.1.9.tgz, r-release (x86_64): BoolNet_2.1.9.tgz, r-oldrel (x86_64): BoolNet_2.1.9.tgz
Old sources: BoolNet archive

Reverse dependencies:

Reverse depends: BoolFilter
Reverse imports: diffeRenTES, epiNEM
Reverse suggests: BiTrinA, pastboon

Linking:

Please use the canonical form https://CRAN.R-project.org/package=BoolNet to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.