The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
A toolkit to perform cross-species analysis based on scRNA-seq data. This package contains 5 main features. (1) identify Markers in each cluster. (2) Cell type annotation (3) identify conserved markers. (4) identify conserved cell types. (5) identify conserved modules of regulatory networks.
| Version: | 1.0.0 |
| Depends: | R (≥ 4.0), Seurat |
| Imports: | pheatmap, pbapply, psych, ROCR, reshape2, dplyr, grDevices, stats, methods, viridisLite |
| Suggests: | knitr, testthat (≥ 3.0.0) |
| Published: | 2022-05-18 |
| DOI: | 10.32614/CRAN.package.CACIMAR |
| Author: | Junyao Jiang |
| Maintainer: | Junyao Jiang <jiangjunyao789 at 163.com> |
| BugReports: | https://github.com/jiang-junyao/CACIMAR/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/jiang-junyao/CACIMAR |
| NeedsCompilation: | no |
| CRAN checks: | CACIMAR results |
| Reference manual: | CACIMAR.pdf |
| Package source: | CACIMAR_1.0.0.tar.gz |
| Windows binaries: | r-devel: CACIMAR_1.0.0.zip, r-release: CACIMAR_1.0.0.zip, r-oldrel: CACIMAR_1.0.0.zip |
| macOS binaries: | r-release (arm64): CACIMAR_1.0.0.tgz, r-oldrel (arm64): CACIMAR_1.0.0.tgz, r-release (x86_64): CACIMAR_1.0.0.tgz, r-oldrel (x86_64): CACIMAR_1.0.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=CACIMAR to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.