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pheatmap: Pretty Heatmaps

Implementation of heatmaps that offers more control over dimensions and appearance.

Version: 1.0.12
Depends: R (≥ 2.0)
Imports: grid, RColorBrewer, scales, gtable, stats, grDevices, graphics
Published: 2019-01-04
DOI: 10.32614/CRAN.package.pheatmap
Author: Raivo Kolde
Maintainer: Raivo Kolde <rkolde at gmail.com>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
CRAN checks: pheatmap results

Documentation:

Reference manual: pheatmap.pdf

Downloads:

Package source: pheatmap_1.0.12.tar.gz
Windows binaries: r-devel: pheatmap_1.0.12.zip, r-release: pheatmap_1.0.12.zip, r-oldrel: pheatmap_1.0.12.zip
macOS binaries: r-release (arm64): pheatmap_1.0.12.tgz, r-oldrel (arm64): pheatmap_1.0.12.tgz, r-release (x86_64): pheatmap_1.0.12.tgz, r-oldrel (x86_64): pheatmap_1.0.12.tgz
Old sources: pheatmap archive

Reverse dependencies:

Reverse depends: Canopy, KOGMWU, survtype, yaConsensus
Reverse imports: ADAPTS, Anaconda, AnnoProbe, artMS, BatchQC, bestridge, binomialtrend, broadSeq, CACIMAR, cape, cardelino, CatsCradle, CB2, CHETAH, cinaR, CINNA, CiteFuse, CleanUpRNAseq, CNVMetrics, coca, consICA, cophescan, covid19.analytics, CytoGLMM, dagLogo, DaMiRseq, dcortools, DEsubs, deTS, DExMA, DGP4LCF, DiscreteGapStatistic, dittoSeq, drclust, DrugSim2DR, DRviaSPCN, eHDPrep, EnrichDO, epigraHMM, FateID, FeatSeekR, FRASER, FuseSOM, GABB, GEInfo, GeneNMF, GEOexplorer, goat, granulator, Grouphmap, GSEMA, HiCcompare, hybridogram, iCellR, iClusterVB, ideal, IDMIR, iglu, ILoReg, imcRtools, immunarch, InteRD, klic, LinTInd, LipidomicsR, lisaClust, loci2path, maftools, MBECS, MetaPhOR, mirTarRnaSeq, mitoClone2, MixLFA, mobileRNA, MOFA2, monocle, MOSClip, multiHiCcompare, NanoStringNCTools, NPflow, omics, OncoSubtype, oppti, OUTRIDER, pcaExplorer, phantasus, PhosR, Pigengene, PLSDAbatch, POWSC, profileplyr, protGear, psSubpathway, R3CPET, RaceID, RCAS, RQdeltaCT, rrvgo, RTN, RTNsurvival, RVenn, SC3, scater, scider, scMappR, scMitoMut, SCORPIUS, scviR, SEtools, sigFeature, signeR, SingleCellSignalR, slanter, SMDIC, SpaCCI, spicyR, SpliceWiz, ssMutPA, sSNAPPY, statVisual, stJoincount, SubtypeDrug, syntenet, systemPipeTools, tidyheatmaps, tidyrules, tinyarray, tmod, umiAnalyzer, VALERIE
Reverse suggests: aggregateBioVar, autonomics, bakR, bandle, BloodCancerMultiOmics2017, bluster, CaDrA, Cepo, chromVAR, CommKern, ComplexHeatmap, dartR, dartR.base, decoupleR, DEGreport, DepInfeR, DESeq2, diverse, dorothea, eclust, excluderanges, fishpond, FlowSOM, gemma.R, genekitr, hdxmsqc, iasva, InteractiveComplexHeatmap, ISAnalytics, isomiRs, LymphoSeq, MAGeCKFlute, MARVEL, memes, MetaNet, MetChem, microeco, mixdir, MsFeatures, NanoTube, nbTransmission, netSmooth, OlinkAnalyze, pagoda2, pctax, Platypus, proDA, progeny, protti, QuantNorm, recount, regionReport, ReporterScore, scaper, scGOclust, SCpubr, scran, sigminer, Single.mTEC.Transcriptomes, SingleR, SpatialOmicsOverlay, spatialTIME, spatzie, systemPipeShiny, TADCompare, treestats, TREG, Voyager, xcms, xcore

Linking:

Please use the canonical form https://CRAN.R-project.org/package=pheatmap to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.