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Visualization and analysis of Vectra Immunoflourescent data. Options for calculating both the univariate and bivariate Ripley's K are included. Calculations are performed using a permutation-based approach presented by Wilson et al. <doi:10.1101/2021.04.27.21256104>.
| Version: | 1.3.4-5 |
| Depends: | R (≥ 2.10) |
| Imports: | magrittr, dplyr, tidyr, ggplot2, scales, grDevices, purrr, spatstat.univar, spatstat.geom, spatstat.explore, RColorBrewer, furrr, future, tidyselect, crayon, pbmcapply, dixon, tibble, stringr |
| Suggests: | knitr, devtools, rmarkdown, testthat (≥ 3.0.0), gridExtra, pheatmap |
| Published: | 2024-06-04 |
| DOI: | 10.32614/CRAN.package.spatialTIME |
| Author: | Jordan Creed [aut], Ram Thapa [aut], Christopher Wilson [aut], Alex Soupir [aut], Oscar Ospina [aut], Julia Wrobel [aut], Brooke Fridley [cph], Fridley Lab [cre] |
| Maintainer: | Fridley Lab <fridley.lab at moffitt.org> |
| BugReports: | https://github.com/FridleyLab/spatialTIME/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/FridleyLab/spatialTIME |
| NeedsCompilation: | no |
| Citation: | spatialTIME citation info |
| Materials: | README |
| CRAN checks: | spatialTIME results |
| Reference manual: | spatialTIME.pdf |
| Vignettes: |
Introduction to spatialTIME |
| Package source: | spatialTIME_1.3.4-5.tar.gz |
| Windows binaries: | r-devel: spatialTIME_1.3.4-5.zip, r-release: spatialTIME_1.3.4-5.zip, r-oldrel: spatialTIME_1.3.4-5.zip |
| macOS binaries: | r-release (arm64): spatialTIME_1.3.4-5.tgz, r-oldrel (arm64): spatialTIME_1.3.4-5.tgz, r-release (x86_64): spatialTIME_1.3.4-5.tgz, r-oldrel (x86_64): spatialTIME_1.3.4-5.tgz |
| Old sources: | spatialTIME archive |
| Reverse suggests: | mxfda, scSpatialSIM |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.