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rmarkdown: Dynamic Documents for R

Convert R Markdown documents into a variety of formats.

Version: 2.29
Depends: R (≥ 3.0)
Imports: bslib (≥ 0.2.5.1), evaluate (≥ 0.13), fontawesome (≥ 0.5.0), htmltools (≥ 0.5.1), jquerylib, jsonlite, knitr (≥ 1.43), methods, tinytex (≥ 0.31), tools, utils, xfun (≥ 0.36), yaml (≥ 2.1.19)
Suggests: digest, dygraphs, fs, rsconnect, downlit (≥ 0.4.0), katex (≥ 1.4.0), sass (≥ 0.4.0), shiny (≥ 1.6.0), testthat (≥ 3.0.3), tibble, vctrs, cleanrmd, withr (≥ 2.4.2), xml2
Published: 2024-11-04
DOI: 10.32614/CRAN.package.rmarkdown
Author: JJ Allaire [aut], Yihui Xie ORCID iD [aut, cre], Christophe Dervieux ORCID iD [aut], Jonathan McPherson [aut], Javier Luraschi [aut], Kevin Ushey [aut], Aron Atkins [aut], Hadley Wickham [aut], Joe Cheng [aut], Winston Chang [aut], Richard Iannone ORCID iD [aut], Andrew Dunning ORCID iD [ctb], Atsushi Yasumoto ORCID iD [ctb, cph] (Number sections Lua filter), Barret Schloerke [ctb], Carson Sievert ORCID iD [ctb], Devon Ryan ORCID iD [ctb], Frederik Aust ORCID iD [ctb], Jeff Allen [ctb], JooYoung Seo ORCID iD [ctb], Malcolm Barrett [ctb], Rob Hyndman [ctb], Romain Lesur [ctb], Roy Storey [ctb], Ruben Arslan [ctb], Sergio Oller [ctb], Posit Software, PBC [cph, fnd], jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/rmd/h/jqueryui/AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Alexander Farkas [ctb, cph] (html5shiv library), Scott Jehl [ctb, cph] (Respond.js library), Ivan Sagalaev [ctb, cph] (highlight.js library), Greg Franko [ctb, cph] (tocify library), John MacFarlane [ctb, cph] (Pandoc templates), Google, Inc. [ctb, cph] (ioslides library), Dave Raggett [ctb] (slidy library), W3C [cph] (slidy library), Dave Gandy [ctb, cph] (Font-Awesome), Ben Sperry [ctb] (Ionicons), Drifty [cph] (Ionicons), Aidan Lister [ctb, cph] (jQuery StickyTabs), Benct Philip Jonsson [ctb, cph] (pagebreak Lua filter), Albert Krewinkel [ctb, cph] (pagebreak Lua filter)
Maintainer: Yihui Xie <xie at yihui.name>
BugReports: https://github.com/rstudio/rmarkdown/issues
License: GPL-3
URL: https://github.com/rstudio/rmarkdown, https://pkgs.rstudio.com/rmarkdown/
NeedsCompilation: no
SystemRequirements: pandoc (>= 1.14) - http://pandoc.org
Citation: rmarkdown citation info
Materials: README NEWS
In views: ReproducibleResearch
CRAN checks: rmarkdown results

Documentation:

Reference manual: rmarkdown.pdf
Vignettes: Lua filters in R Markdown (source, R code)
Learn R Markdown (source, R code)

Downloads:

Package source: rmarkdown_2.29.tar.gz
Windows binaries: r-devel: rmarkdown_2.29.zip, r-release: rmarkdown_2.29.zip, r-oldrel: rmarkdown_2.29.zip
macOS binaries: r-release (arm64): rmarkdown_2.29.tgz, r-oldrel (arm64): rmarkdown_2.29.tgz, r-release (x86_64): rmarkdown_2.29.tgz, r-oldrel (x86_64): rmarkdown_2.29.tgz
Old sources: rmarkdown archive

Reverse dependencies:

Reverse depends: adea, basecallQC, BDP2, BoneProfileR, CellNOptR, comparer, ContourFunctions, DeMixT, dsld, FAMetA, frequency, GauPro, netresponse, qeML, qra, RcmdrPlugin.UCA, RPA, sangeranalyseR, TestFunctions, toweranNA, tufterhandout
Reverse imports: abseqR, accessr, actel, activAnalyzer, addinslist, addinsOutline, alevinQC, AlpsNMR, amanida, AMARETTO, amplican, ANOVAIREVA, ANOVAShiny, ANOVAShiny2, AnVILPublish, apa, apisensr, archetyper, ari, attachment, autoharp, aweSOM, baizer, BETS, binb, bioclim, biocompute, BiocStyle, BiocWorkflowTools, biodosetools, BioImageDbs, bioregion, blandr, blastula, BLCOP, blogdown, BLRShiny, BLRShiny2, bnem, bookdown, boot.heterogeneity, BrailleR, brinton, bsplus, bumblebee, CALANGO, CARNIVAL, CCWeights, CEMiTool, ChAMP, chicane, chimeraviz, ChIPexoQual, chronicle, cleanrmd, clinDataReview, clintrialx, CLUSTShiny, CMShiny, Cogito, CommonDataModel, compareGroups, COMPASS, compcodeR, condformat, conflr, convergEU, corporaexplorer, corto, countsimQC, cppcheckR, cTOST, CTShiny, CTShiny2, customiser, cytofQC, D4TAlink.light, daiquiri, data.validator, DataExplorer, dataMaid, DataPackageR, dataReporter, dbGaPCheckup, DEP, DEploid, DescrTab2, DiscoRhythm, distill, dlookr, dogesr, easyreporting, eCerto, ecocomDP, effectR, ELMER, emayili, EML, encryptedRmd, EpiCompare, EpiSignalDetection, epitweetr, epoxy, esATAC, eseis, exams, exams2forms, exams2learnr, explore, FactoInvestigate, fastqcr, fidelius, FishPhyloMaker, flashr, flexdashboard, flexsiteboard, flextable, flipbookr, flowAI, flowPloidy, flying, FlyingR, formattable, ftExtra, gCrisprTools, GeneTonic, genogeographer, ggPMX, gistr, gitdown, Gmisc, gmoTree, GOFShiny, govdown, grapesAgri1, grateful, greenfeedr, gretlR, GWASinspector, handwriterApp, HCATonsilData, HiCool, Hmisc, hoardeR, hoodscanR, htmlwidgets, hypeR, idcnrba, ideal, IDEATools, ifCNVR, igate, iheiddown, InspectionPlanner, INSPECTumours, interca, interpretCI, iraceplot, irtawsi, jds.rmd, kableExtra, kfa, knitrBootstrap, KNNShiny, KnowSeq, komaletter, labeleR, latrend, learnr, levi, lfmm, LifeInsureR, lifeR, liftr, lingglosses, linl, listdown, litteR, MACSQuantifyR, mailmerge, MassWateR, matlib, MatrixQCvis, MBECS, MBQN, mcboost, mclustAddons, MDSPCAShiny, memoiR, memor, MendelianRandomization, mergen, mergenstudio, meshr, metabolic, metaseqR2, midoc, minidown, mitch, mlts, MNLR, monographaR, MRZero, NACHO, NBShiny, NBShiny2, NBShiny3, ncappc, NDP, NetSimR, ngsReports, OddsPlotty, officedown, ofpetrial, omicplotR, OMICsPCA, OmnipathR, openintro, ORION, orloca, oRus, OSLdecomposition, ottrpal, pagedown, pakret, papaja, PaRe, parsermd, pathfindR, pcaExplorer, personr, PFIM, phonfieldwork, PhytosanitaryCalculator, pinp, PINstimation, pipeFrame, pkgdown, pkgnet, plotcli, polished, postcards, posterdown, PreKnitPostHTMLRender, PREPShiny, prereg, prettydoc, PROBShiny, protGear, ptable, PTXQC, qbld, qgshiny, quarto, QurvE, radiant.data, randomForestExplainer, RawHummus, RCAS, rchallenge, rcompendium, rddtools, rdtLite, readme2vignette, rebook, regionReport, Relectoral, repana, RepoGenerator, reportfactory, reprex, resumer, revealjs, rexer, RInno, rjtools, rmake, RmdConcord, rmdfiltr, rmdformats, rmdplugr, rmzqc, Rpadrino, RPyGeo, rqti, rrtable, RTCGA, rtemps, rticles, rtiddlywiki, rUM, rWCVP, SAMtool, SBGNview, SBGNview.data, scFeatures, scientific, scifer, scmeth, scTensor, scTGIF, sdcMicro, SEAHORS, seminr, SeqSQC, shattering, SHELF, shinyepico, shinyHeatmaply, shinySbm, shinytest2, singleCellTK, siteymlgen, sketchy, smallsets, SmartEDA, SNPannotator, softbib, spANOVA, SpatialfdaR, SpTe2M, ssd4mosaic, STAT, STAT2, statcheck, Statsomat, statsr, statVisual, StepReg, stevemisc, stevetemplates, strandCheckR, supportR, svSweave, swirlify, SWTools, synapter, TBox, TDLM, teal.modules.clinical, teal.reporter, TestAnaAPP, TestGardener, texor, thaipdf, tidyCDISC, timevis, tint, TPP, trackdown, tufte, tutorial.helpers, ubiquity, uiucthemes, umx, upstartr, validmind, vidger, vitae, vivainsights, voiceR, volker, VTShiny, wallace, webexercises, worcs, workflowr, wpa, xaringan, yamlme, ymlthis
Reverse suggests: a4Classif, a4Core, a4Preproc, a4Reporting, AalenJohansen, ABACUS, ABC.RAP, abess, ABHgenotypeR, abn, abstr, abstractr, AcademicThemes, academictwitteR, accelerometry, AccelStab, AcceptReject, accessibility, accessrmd, accrualPlot, ACE, ace2fastq, ACEsimFit, ACEt, Achilles, acnr, act, ActFrag, activatr, ActivePathways, ActivityIndex, actLifer, actuaryr, actxps, ADAM, ADAPT, adaptDiag, AdaptGauss, adaptiveGPCA, adaptIVPT, adaptMT, adaptr, adaR, adas.utils, AdaSampling, adass, add2ggplot, additive, addScales, adductData, adductomicsR, adegraphics, adelie, adepro, adept, adespatial, adestr, adfExplorer, adformR, AdhereR, AdhereRViz, ADImpute, adjclust, adjustedCurves, admiral, admiral.test, admiraldev, admiralonco, admiralophtha, admiralpeds, admiralvaccine, admix, admixr, admmDensestSubmatrix, ADMMsigma, admtools, ADMUR, adnuts, adobeanalyticsr, adoptr, ADPclust, adpss, ADSIHT, AdvancedBasketballStats, adventr, AdverseEvents, adw, aebdata, aeddo, aedseo, aelab, AeRobiology, AeroSampleR, afcharts, afdx, afex, affiner, affinity, AffiXcan, affycoretools, afpt, AFR, afttest, ag5Tools, agena.ai, agfh, aggregateBioVar, aggTrees, AGHmatrix, aglm, agricolaeplotr, agridat, agriutilities, agriwater, AgroR, ags, agua, agvgd, AHEnsDbs, AHLRBaseDbs, AHM, AHMassBank, AHMeSHDbs, ahMLE, ahnr, AHPathbankDbs, AHPtools, ahptopsis2n, AHPubMedDbs, AHPWR, AHWikipathwaysDbs, aIc, aides, aifeducation, aihuman, AIPW, aire.zmvm, airGR, airGRdatassim, airGRiwrm, airGRteaching, AirMonitor, airpart, airportr, airqualityES, airr, airship, airt, AIscreenR, AIUQ, ajv, akc, alabaster, alabaster.base, alabaster.bumpy, alabaster.files, alabaster.mae, alabaster.sce, alabaster.schemas, alabaster.se, alabaster.spatial, alabaster.string, alabaster.vcf, alakazam, aLBI, alcyon, ALDEx2, aldvmm, ale, ALFAM2, alfr, alfred, algo, algorithmia, alien, allcontributors, AllelicImbalance, AllelicSeries, allestimates, allMT, allofus, Allspice, ALLSPICER, alluvial, almanac, alookr, alpaca, alpha.correction.bh, AlphaBeta, alphabetr, alphaci, AlphaMissense.v2023.hg19, AlphaMissense.v2023.hg38, AlphaMissenseR, alphaN, AlphaPart, AlphaSimR, altair, amadeus, amanpg, amapGeocode, amapro, AMAPVox, amazonadsR, amazons3R, amazonspR, ambit, AMCTestmakeR, Amelia, amelie, amen, amerifluxr, ammistability, AMOUNTAIN, amp, AmpGram, ampir, AMPLE, AMR, amscorer, amt, anabel, AnalysisLin, analyzer, AnanseSeurat, Anaquin, AnchorRegression, ANCOMBC, andrews, Andromeda, andurinha, ANF, AnglerCreelSurveySimulation, anim.plots, animalcules, AnimalSequences, animate, animbook, animint2, anipaths, anndata, AnnoProbe, annotater, AnnotationBustR, AnnotationFilter, AnnotationForge, AnnotationHub, AnnotationHubData, annotatr, ANOFA, anomalize, anomo, ANOPA, anovir, anscombiser, antaresEditObject, antaresProcessing, antaresRead, antaresViz, AnthropMMD, anticlust, antitrust, AnVIL, AnVILAz, AnVILBase, AnVILBilling, AnVILGCP, anyLib, ao, aoos, aopdata, aorsf, AOV1R, apache.sedona, APackOfTheClones, APAlyzer, APCalign, apcf, APCtools, aPEAR, apeglm, apex, apexcharter, aphid, aphylo, api2lm, APL, apmx, Apoderoides, apollo, appeears, appleadsR, applicable, appsflyeR, apsimx, apyramid, aqp, AquaBEHER, AQuadtree, AquaticLifeHistory, arcgeocoder, arcgislayers, ArchaeoPhases, archeofrag, archeoViz, archetypal, archivist, arcpullr, arcpy, arctools, ards, areal, arealDB, arena2r, arenar, arf, argoFloats, argonR, ARGOS, argparse, ARIbrain, arkdb, arlclustering, armspp, ARPALData, ARPobservation, arrangements, arrow, arsenal, artMS, ARTofR, ARTool, artpack, ARTtransfer, ARUtools, aRxiv, asciicast, asciiSetupReader, ascotraceR, ashapesampler, ashr, ASICS, ASICSdata, askgpt, asmbPLS, aspi, aspline, aSPU, ASRgenomics, assertable, assertions, assertr, assessor, AssessORF, AssetAllocation, ASSIGN, assignPOP, assignR, ASSISTant, AssocBin, assorthead, ast2ast, asteRisk, ASURAT, asus, asymmetry, asymptor, atable, ATACseqQC, ATACseqTFEA, ATbounds, ATE.ERROR, atena, ath1121501frmavecs, atlasapprox, AtlasMaker, ATNr, atpolR, ATQ, atrrr, atSNP, attempt, attention, attrib, AUCell, auctestr, auctionr, audiometry, auditor, augmentedRCBD, auk, ausplotsR, AustralianPoliticians, auth0, AutoDeskR, autoFC, autoimage, autonomics, autoRasch, autoReg, AutoScore, autoScorecard, autoslider.core, autostats, autostsm, autothresholdr, autoTS, autovi, AutoWMM, AuxSurvey, avar, AvInertia, aVirtualTwins, avocado, avotrex, aweek, awinR, aws.alexa, aws.ecx, aws.wrfsmn, awst, azlogr, AzureAuth, AzureCognitive, AzureContainers, AzureCosmosR, AzureGraph, AzureKeyVault, AzureKusto, azuremlsdk, AzureQstor, AzureRMR, AzureStor, AzureTableStor, AzureVision, AzureVM, BaalChIP, babelgene, babelmixr2, babette, babynamesIL, backbone, backpipe, backShift, baclava, bacon, bacondecomp, baffle, bage, baggr, baguette, bagyo, bain, baker, bakR, baldur, Ball, BALLI, bama, bambu, bamlss, bamm, bamp, bamsignals, bandicoot, banditpam, BANDITS, banditsCI, bandle, banffIT, bang, bangladesh, Banksy, bannerCommenter, banocc, BANOVA, baorista, BAR, baRcodeR, barcodetrackR, bark, barrks, BART, bartcs, baRulho, BAS, base.rms, base64url, baseballr, basedosdados, basemodels, BaseSet, BASiCS, BASiCStan, basictabler, basilisk, basilisk.utils, BASiNET, BASiNETEntropy, basket, baskexact, batata, batchelor, BatchGetSymbols, batchmix, BatchQC, batchtma, batchtools, bate, BAwiR, bayclumpr, bayes4psy, bayesAB, bayesassurance, BayesCombo, bayesCT, bayesdfa, BayesDLMfMRI, bayesDP, BayesESS, BayesFactor, BayesFBHborrow, BayesfMRI, bayesforecast, BayesGmed, BayesGOF, BayesGP, BayesGrowth, bayesian, BayesianFitForecast, BayesianMCPMod, BayesianMediationA, BayesianNetwork, BayesianPlatformDesignTimeTrend, BayesianPower, BayesianReasoning, BayesianTools, bayesianVARs, bayesImageS, bayeslm, BayesLN, bayesm, BayesMallows, bayesMeanScale, bayesmeta, bayesmlogit, bayesmove, bayesnec, bayesplay, bayesplot, bayesPO, BayesPostEst, BayesPPD, BayesPPDSurv, bayesRecon, Bayesrel, bayesrules, BayesSampling, BayesSpace, BayesSUR, BayesSurvival, bayestestR, BayesTools, bayfoxr, baymedr, bayNorm, baytrends, bbknnR, bbmix, bbnet, bbreg, bbw, bcaboot, BCClong, BCDAG, bcdata, BCEA, bcf, Bchron, bcmaps, bcpa, bcROCsurface, bdc, BDgraph, bdl, bdlp, bdots, bdpar, bdrc, bdscale, beachmat, beachmat.hdf5, beadplexr, BeadSorted.Saliva.EPIC, beakr, BEAMR, beanz, beastier, beastt, beautier, BEclear, BED, bedr, BeeBDC, beeca, BeeGUTS, beer, beezdemand, behaviorchange, belg, BElikelihood, bellreg, benchmarkfdrData2019, benchmarkme, bennu, benthos, Bernadette, berryFunctions, BERT, besthr, bestNormalize, BESTree, bestridge, betaclust, betaDelta, betaHMM, betaMC, betaNB, BetaPASS, betaSandwich, betaselectr, bettr, BeviMed, BFF, BFI, BFpack, bfw, BG2, BgeeCall, BgeeDB, BGGM, bggum, BGmisc, bgms, BGPhazard, BGVAR, bgw, bhmbasket, BHMSMAfMRI, BHSBVAR, bib2df, biblio, bibliometrix, biblionetwork, BiCausality, biClassify, biclustermd, BICORN, bidask, BiDimRegression, BIEN, bife, BiFET, bifurcatingr, BIGDAWG, bigDM, bigergm, BIGL, biglasso, bigleaf, bigMap, bignum, bigQF, bigstep, BigVAR, billboarder, BinaryDosage, binaryMM, BindingSiteFinder, binfunest, bingadsR, binGroup2, binman, BinMat, binomialRF, binovisualfields, BINtools, bio3d, bioacoustics, bioassayR, biobroom, biobtreeR, bioC.logs, bioCancer, BiocBaseUtils, BiocBook, BiocCheck, BiocFileCache, BiocHubsShiny, BiocIO, BioCircos, BiocManager, BiocNeighbors, BioCor, BiocPkgTools, BioCro, biocroxytest, BiocSet, BiocSingular, BiocSklearn, biocthis, biodb, biodbChebi, biodbHmdb, biodbNcbi, biodbNci, biodbUniprot, BioGA, biogrowth, Bioi, bioimagetools, bioinactivation, biomaRt, biomartr, BIOMASS, biometryassist, biomformat, BioNAR, BioNERO, biopixR, BioPlex, BioPred, BioQC, bioRad, BioRssay, biosampleR, biosensors.usc, bioseq, biosigner, bioSNR, Biostatistics, biotic, BioTIMEr, BioTIP, biotmle, biotools, BioVenn, bipartiteD3, bipd, biplotEZ, birdie, biscale, biscuiteer, biscuiteerData, BisqueRNA, bistablehistory, bit, bitmexr, bittermelon, bivariateLeaflet, BivRec, biwavelet, bizdays, BKTR, BLA, blacksheepr, blaise, blapsr, blindreview, blink, bliss, blockCV, blocklength, BloodCancerMultiOmics2017, BloodGen3Module, blorr, BLPestimatoR, blscrapeR, bluebike, bluster, bmass, bmggum, bmlm, bmm, BMRBr, bmscstan, bmstdr, bnbc, bnclassify, bndovb, bnma, bnmonitor, BNPdensity, bnpsd, bnRep, BNrich, BOBaFIT, bodenmiller, bodycompref, bodymapRat, BOJ, bolsec, BoltzMM, bonsai, bonsaiforest, boomer, boostingDEA, bootCT, bootf2, bootGOF, bootPLS, bootUR, bootwar, borealis, borrowr, BoSSA, BOSSreg, BoundaryStats, boundingbox, box, box.linters, boxfilter, boxly, boxr, bp, bpa, bpbounds, bpmnR, bpnreg, bpp, BPRMeth, bRacatus, bracer, brada, braidReports, braidrm, brainKCCA, BranchGLM, BRcal, BRDT, brea, BREADR, breakaway, breakDown, breakfast, breathtestcore, breathteststan, brendaDb, BRETIGEA, BREW3R.r, brgedata, brglm2, brickster, BridgeDbR, bridgedist, bridgesampling, bridgr, brisk, brm, brms, brms.mmrm, brmsmargins, broadSeq, BrokenAdaptiveRidge, brokenstick, brolgar, broom, broom.helpers, broom.mixed, brotli, BrowserViz, bruneimap, brunnermunzel, BRVM, bs4cards, bs4Dash, bscui, BSgenomeForge, bSi, bSims, bsitar, bslib, BSPBSS, bsseq, bssm, BSSoverSpace, bstrl, BSTZINB, bsub, BSW, bsynth, BT, btb, BTYD, BTYDplus, bubbleHeatmap, BubbleTree, bubblyr, bugphyzz, bugsigdbr, buildmer, buildr, bulkAnalyseR, bulkreadr, bulletcp, bullseye, bumbl, BumpyMatrix, bunching, bunchr, bundle, bupaverse, burnr, busdater, businessPlanR, BUSpaRse, butcher, bvartools, bvhar, bwsTools, bytescircle, c2c, c2z, c3, C50, cadd.v1.6.hg19, cadd.v1.6.hg38, CADF, CaDrA, CAEN, caesar, CAESAR.Suite, CAGEfightR, cageminer, CAGEr, CAISEr, CalcThemAll.PRM, calculus, calendar, calibmsm, calibrar, CalibrationCurves, calidad, callback, callme, callsync, calm, calmr, calpassapi, camcorder, campaignmanageR, campfin, campsis, campsismod, camsRad, camtrapR, CaMutQC, canadamaps, canadianmaps, canaper, cancensus, canceR, CancerGram, cancerR, cancerscreening, candisc, Canek, canprot, cansim, canvasXpress, cape, caper, capesR, capitalR, capl, captr, caracas, caRamel, carbonate, carbondate, carbonr, card, card.pro, cardelino, Cardinal, CardinalIO, cardinalR, CardinalWorkflows, care4cmodel, caRecall, CareDensity, careless, caret, caretEnsemble, caROC, carpenter, cartograflow, cartographer, cartographr, cartography, casabourse, cascadess, cascsim, casebase, CaseBasedReasoning, cases, casino, CASMAP, cassandRa, cassowaryr, CAST, cat2cat, catalog, CATALYST, catalytic, CatastRo, categoryCompare, catmaply, catregs, cats, catsim, cauphy, causact, causal.decomp, causalBatch, causalCmprsk, causaldrf, CausalGPS, CausalImpact, CausalMBSTS, causaloptim, causalOT, CausalQueries, causalsens, causalSLSE, CB2, cbaf, CBEA, cBioPortalData, cbioportalR, CBNplot, cbpManager, CBRT, cbsodataR, CCAMLRGIS, ccdR, ccfindR, ccImpute, ccmap, ccmEstimator, ccoptimalmatch, ccostr, CCPlotR, ccpsyc, ccRemover, cdata, CDatanet, cder, cdfquantreg, CDI, CDMConnector, cdparcoord, CDsampling, ceas, CEDA, celaref, celarefData, celda, CellBarcode, cellbaseR, CellBench, celldex, CelliD, cellity, cellKey, cellmigRation, CellMixS, cellpypes, cellranger, cellscape, celltrackR, CellTrails, cellularautomata, cellxgenedp, cencrne, censcyt, censobr, censored, Census2016, censusapi, censusr, centr, CEOdata, Cepo, cepumd, cequre, cercospoRa, ceRNAnetsim, ceRtainty, Certara.R, Certara.RsNLME, Certara.RsNLME.ModelBuilder, Certara.VPCResults, ceser, cesR, cetcolor, CeTF, CexoR, CFAcoop, cfda, cfdnakit, cfDNAPro, cffr, cfr, CFtime, cfTools, cfToolsData, CGGP, cgmquantify, CGNM, CGPfunctions, chainbinomial, ChainLadder, chameleon, ChAMP, chandwich, changepoints, ChangePointTaylor, changeS, chantrics, charcuterie, charlatan, chattr, checkdown, checkhelper, checkmate, checkpoint, checkthat, cheem, cheese, chem16S, chemCal, chemdeg, ChemmineOB, ChemmineR, chemodiv, ChemoSpec, ChemoSpec2D, chess, chessboard, chest, ChestVolume, CHETAH, chevron, Chicago, chihaya, childesr, chilemapas, chillR, chipenrich, chipenrich.data, ChIPexoQualExample, chipPCR, ChIPpeakAnno, ChIPseeker, chipseqDBData, chirps, chk, chkptstanr, chlorpromazineR, CHNOSZ, CHOIRBM, cholera, CholWishart, chooseGCM, chouca, chromhmmData, chromoMap, ChromSCape, chromVAR, chronicler, chronochrt, CHRONOS, chunkhooks, chyper, cia, CIARA, ciccr, cicero, CIEE, CIfinder, cifti, ciftiTools, CIMICE, cimir, cinaR, CINmetrics, CINNA, cinterpolate, CIPerm, cir, circacompare, CirceR, circhelp, circle, circlesplot, circlize, circRNAprofiler, CircSeqAlignTk, circularEV, CircularSilhouette, circumplex, cIRT, cisp, citationchaser, CiteFuse, cities, CITMIC, citmre, cito, ciTools, ciuupi, ciuupi2, civ, civis, CJAMP, cjbart, Ckmeans.1d.dp, CKMRpop, clam, clarabel, clarifai, clarify, ClassifyR, classInt, clc, cleanepi, cleaner, Cleanet, cleanNLP, cleanr, cleanTS, cleanUpdTSeq, CleanUpRNAseq, cleaver, clevRvis, clhs, cli, clickableImageMap, ClickHouseHTTP, clidatajp, clifford, clifro, climaemet, climate, 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PowerUpR, powRICLPM, POWSC, PP, ppclust, ppcseq, ppdiag, ppendemic, PPforest, ppgmmga, PPLasso, PPQplan, pprof, ppseq, PPTcirc, PPtreeregViz, pqsfinder, PRA, pracpac, PracTools, pram, PRANA, prcbench, prcr, PRDA, pre, PRECAST, pRecipe, precisely, precisePlacement, preciseTAD, preciseTADhub, precommit, precrec, predict3d, predictMe, predictNMB, predictrace, predint, PredPsych, predRupdate, PredTest, predtools, prefeR, prepplot, preputils, preregr, presenter, presentes, presize, PressPurt, prettyB, PrettyCols, prettyglm, PrevMap, prevR, prevtoinc, PriceIndices, pricelevels, pricesensitivitymeter, prim, primarycensored, primirTSS, PrInCE, printr, prioGene, prior3D, priorCON, PriorGen, prioriactions, prioritizr, prioritylasso, priorsense, prism, prismadiagramR, proActiv, ProAE, probably, ProbBayes, ProbBreed, probout, processanimateR, processcheckR, processmapR, processmonitR, processpredictR, ProcMod, procs, proDA, prodigenr, ProFAST, profileplyr, profiplots, profoc, ProfoundData, profrep, profvis, progeny, ProgModule, PROJ, projections, projectR, projmgr, projpred, ProliferativeIndex, prolific.api, pRoloc, pRolocGUI, promises, promor, PRONE, prophet, proporz, proPubBills, PROscorer, PROscorerTools, PROsetta, ProSGPV, prospectr, ProSportsDraftData, protein8k, ProteoDisco, ProteoMM, protHMM, protr, ProTrackR2, protti, proustr, provDebugR, proverbs, provTraceR, proxyC, prozor, prqlr, PRSPGx, prt, prWarp, PSAboot, psborrow, psborrow2, psc, pscore, psd, PSDistr, psdr, pseudohouseholds, pseval, PSF, psfmi, PSGoft, psichomics, psidread, PSIM, PSIndependenceTest, psm3mkv, PSMatch, psmineR, pspatreg, psqn, PSS.Health, PSSMCOOL, pssmooth, psSubpathway, PSweight, psychmeta, psycho, psycModel, psyntur, psyverse, ptairData, ptairMS, pTITAN2, ptmixed, ptools, ptspotter, PubChemR, public.ctn0094data, public.ctn0094extra, publipha, PubMedMining, pubmedR, pubtatordb, PUlasso, puls, pulsar, PupillometryR, PupilPre, PureCN, puremoe, pureseqtmr, purgeR, PurpleAirAPI, purrr, 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reda, ReDaMoR, redatam, redbookperu, REDCapCAST, REDCapDM, REDCapExporter, REDCapR, REDCapTidieR, redditadsR, RedditExtractoR, REddyProc, REddyProcNCDF, RedeR, RedisBaseContainer, Rediscover, RedisParam, redist, redistmetrics, redland, redlistr, rEDM, redux, ref.ICAR, refer, refineR, refinr, reflimR, refseqR, refset, refuge, RegCombin, regDIF, RegEnrich, regionalpcs, RegionalST, regioncode, regioneR, regioneReloaded, regions, registr, regmed, regmedint, regmhmm, RegParallel, RegrCoeffsExplorer, regreplaceR, regressinator, regsplice, regtools, regutools, rehh, ReinforcementLearning, ReIns, relatable, RelDists, relgam, ReliaGrowR, relMix, rema, remap, remedy, remify, remindR, remiod, REMLA, remotePARTS, remotes, REMP, rempsyc, remss, remstats, remstimate, REN, rENA, rentrez, renv, renz, repello, replacer, replicateBE, Repliscope, report, reporter, repoRter.nih, ReporterScore, ReportingTools, reportRmd, representr, represtools, reproducible, RepViz, Require, requireR, rerddap, 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rmdl, rmdpartials, RMediation, rmelting, rmetalog, RMFM, rMIDAS, rminizinc, RMixtComp, RMLPCA, Rmmquant, Rmolt, rMOST, rmsfuns, rmt, RMT4DS, RMTL, rMVP, rmytarget, RNAAgeCalc, rnaCrosslinkOO, RNAdecay, rnaEditr, RNAmf, RNAmodR, RNAmodR.AlkAnilineSeq, RNAmodR.Data, RNAmodR.ML, RNAmodR.RiboMethSeq, RNAsense, rnaseqcomp, RNAseqCovarImpute, RNAseqNet, RNAseqQC, rnassqs, rnaturalearth, rnbp, rNeighborGWAS, rNeighborQTL, rnetcarto, RNewsflow, RNeXML, RNGforGPD, RNHANES, rnmamod, Rnmr1D, rnn, rnndescent, rnpn, rnrfa, roadoi, roads, roahd, roastgsa, robber, robin, RobinCar, robis, RoBMA, robnptests, robotoolbox, robotstxt, RoBSA, robsel, robservable, robsurvey, RoBTT, robust2sls, robustfa, robustlm, robustmatrix, robvis, ROC, ROCaggregator, ROCFTP.MMS, ROCit, rock, rocker, ROCpAI, ROCR, ROCsurf, rODE, rodeo, rofanova, Rogue, rolap, RolDE, rollama, rolldown, rollup, rolog, rolr, rols, romic, roots, rope, ROpenCVLite, ropenmeteo, roperators, ropercenter, ropls, ROSeq, roseRF, rosetta, rosetteApi, rosmium, rosv, rotations, rotl, rotor, round, roundwork, Routliers, roxygen2, roxytest, rPACI, rpact, rpaleoclim, rPBK, RPEXE.RPEXT, RPhosFate, rphylopic, rpivotTable, rplanes, rplum, rpmodel, Rpoet, RPointCloud, Rpolyhedra, RPostgres, RPPASPACE, rpredictit, rPref, RPresto, rprev, rprime, rprimer, Rprofet, rprojroot, rprojtree, RProtoBufLib, rpsftm, rptR, rpx, Rqc, rqdatatable, RQdeltaCT, RQEntangle, rQSAR, rqt, rquery, Rraven, rRDP, rrefine, rrMixture, RRMLRfMC, RRphylo, RRPP, rrr, RRreg, RRRR, rrscale, rrvgo, rsae, rSAFE, RSAGA, rsample, Rsampling, rsat, rsatscan, rscc, RScelestial, rsconnect, rscopus, rscorecard, rScudo, RSDA, rSDI, rSEA, RSelenium, rsemmed, RSentiment, RSeqAn, rsetse, rsi, rsimsum, rsinaica, rslurm, rsm, rsmatch, rsmatrix, rsocialwatcher, rsofun, RSP, rSPDE, RSpectra, rsppfp, RSQL, RSQLite, RSqlParser, RSSL, RSSthemes, rstan, rstanarm, rstanemax, rstantools, rstatix, rstudioapi, rsurv, rsurveycto, rsvddpd, rsvg, rSWeeP, rsyncrosim, rt, rtables, RTCC, RTCGA.clinical, RTCGA.CNV, RTCGA.methylation, RTCGA.miRNASeq, RTCGA.mRNA, RTCGA.mutations, RTCGA.PANCAN12, RTCGA.rnaseq, RTCGA.RPPA, RTCGAToolbox, rTCRBCRr, rtdists, rTensor2, rticulate, rties, RTIGER, rtika, RTMB, rtmpt, RTN, RTNduals, RTNsurvival, rtodoist, rtoot, rTorch, rTPC, Rtpca, rtpcr, Rtrack, RTransferEntropy, rtrek, rtrend, rtrim, rTRIPLEXCWFlux, rTRM, rTRNG, Rtropical, rtry, RTSA, RtsEva, RTTWebClient, rtweet, rTwig, Rtwobitlib, rubias, rucrdtw, rugarch, ruin, ruler, rules, rumidas, ruminate, runcharter, runibic, runner, runstats, rush, rust, RUVcorr, RVA, rvec, Rveg, RVenn, RVerbalExpressions, rvertnet, rvest, rviewgraph, Rvisdiff, rvisidata, RVS, rwarrior, rwavelet, Rwclust, RWDataPlyr, rwebstat, rwhatsapp, rwicc, rWikiPathways, RWildbook, rWishart, RWmisc, rworkflows, RWsearch, Rwtss, rwty, rxode2, Ryacas, Ryacas0, ryandexdirect, rym, rYWAASB, RZooRoH, s2net, S4Arrays, S7, sabre, saccadr, SADISA, saebnocov, saeHB, saeHB.ME.beta, saeHB.panel, saeHB.panel.beta, saeHB.spatial, saeHB.twofold, saeHB.ZIB, saekernel, saePseudo, saeRobust, saeSim, safejoin, safestats, safetyGraphics, sageR, SAIGEgds, salad, salesforcer, SAMBA, samc, SAME, SAMGEP, sampbias, sampledatasets, samplesizeCMH, SampleSizeDiagnostics, samplezoo, samplingbook, samplingDataCRT, samplingin, samplingR, SamplingStrata, samplr, SAMprior, samurais, SanFranBeachWater, SangerTools, sanityTracker, sanketphonetictranslator, sankeywheel, SANTA, santaR, santoku, sanzo, saotd, sapevom, sapfluxnetr, sapo, sara4r, sarp.snowprofile, sarp.snowprofile.alignment, sars, sasfunclust, SASmarkdown, sass, sassy, satdad, satellite, satres, satuRn, SaturnCoefficient, SAVER, savvyr, SBICgraph, sbl, sbm, SBMSplitMerge, SBMTrees, sbo, sbtools, sbw, SC.MEB, SC2API, SC3, scaeData, scaffolder, ScaledMatrix, scalpel, scanMiR, scanMiRApp, scanMiRData, scAnnotate, scAnnotatR, scanstatistics, SCANVIS, scaper, scapesClassification, scapGNN, scaRabee, SCArray, SCArray.sat, scATAC.Explorer, scater, scatterbar, scatterD3, scatterHatch, scattermore, scatterpie, scatterPlotMatrix, scBFA, SCBN, scBSP, scbursts, scCAN, scCATCH, scCB2, scClassify, sccomp, scCustomize, scDataviz, SCDB, scDblFinder, scDDboost, scde, scDECO, SCdeconR, scDesign3, scdhlm, scDiagnostics, scDiffCom, scDIFtest, scDotPlot, scds, scellpam, SCEM, scenes, SCEnt, SCFA, scFeatureFilter, scGate, scGOclust, scGPS, sched, schex, scholar, SchoolDataIT, scHOT, schrute, schtools, SCIBER, scicomptools, scifigure, scimo, SCIntRuler, scipub, sciRmdTheme, scITD, scLink, sclr, scmap, scMappR, scMerge, scMET, scMitoMut, scModels, scMultiome, scMultiSim, SCnorm, scone, Sconify, SCOPE, scoper, SCOPRO, scorecard, scoredec, scoreInvHap, scorepeak, scoringRules, scoringutils, SCORNET, SCORPIUS, SCOUTer, scp, scPCA, scpdata, scPipe, scPloidy, scplot, scpoisson, SCpubr, scR, scran, scrapper, scReClassify, scRecover, screenCounter, ScreenR, screenshot, scregclust, scRepertoire, scribe, SCRIP, scriptexec, scriptloc, scrm, scRNAseq, scRNAseqApp, scrobbler, scrollrevealR, scruff, scrutiny, scry, scryr, scShapes, scSorter, scSpatialSIM, scTHI, SCtools, scTreeViz, scuttle, sdam, SDAR, SDAResources, sdcHierarchies, sdcLog, sdcSpatial, sdcTable, SDEFSR, sdmpredictors, sdmTMB, SDMtune, SDPDmod, sdrt, sdtm.oak, sdtmchecks, sdtmval, SEAGLE, seahtrue, searcher, SEARS, season, seasonal, SeBR, sechm, secr, secret, secrlinear, secsse, secuTrialR, sedproxy, see, seecolor, SeedMatchR, seedr, seedreg, seeds, seeker, seer, segclust2d, segmenter, segmenTier, segmentr, segRDA, segregation, segtest, Select, SelectBoost, selection.index, SelectionBias, selectKSigs, selenider, seleniumPipes, semantic.dashboard, semEff, semfindr, semhelpinghands, semicmprskcoxmsm, SemiEstimate, semlbci, semlrtp, semmcci, SemNetCleaner, SemNetDictionaries, semnova, semPower, semptools, SEMsens, semtree, semver, sendigR, sendmailR, sensemakr, sensiPhy, sensobol, SenSpe, sentiment.ai, SentimentAnalysis, sentopics, seq.hotSPOT, SeqArray, seqCAT, seqcombo, SeqGate, seqgendiff, seqhandbook, seqimpute, SeqKat, seqLogo, seqmagick, SeqNet, seqsetvis, seqtrie, SequenceSpikeSlab, sequoia, serosv, serrsBayes, servosphereR, servr, sesame, sesameData, SESraster, sessioninfo, SEtools, settings, SeuratObject, sevenbridges, sevenbridges2, sevenC, seventyGeneData, sf, sfarrow, sfcr, sfcurve, sfdct, sfdep, SFEData, sffdr, sfhotspot, sfinx, sfnetworks, sfo, SFSI, sftime, sftrack, sgat, sgboost, SGCP, SGDinference, sgmodel, sGMRFmix, SGP, SGPdata, sgs, SGSeq, sgsR, sgstar, shadowtext, shapeNA, SHAPforxgboost, ShapleyOutlier, ShapleyValue, shapr, shapviz, shar, SharedObject, SharkDemography, sharp, sharpshootR, shazam, ShellChron, SherlockHolmes, shiftR, ShiftShareSE, shiny, shiny.benchmark, shiny.blueprint, shiny.destroy, shiny.emptystate, shiny.exe, shiny.fluent, shiny.gosling, shiny.i18n, shiny.react, shiny.reglog, shiny.semantic, shiny.telemetry, shinyaframe, shinyauthr, shinybusy, shinyChatR, shinyCohortBuilder, shinyCox, shinyCyJS, shinydashboardPlus, shinydbauth, shinyEffects, shinyExprPortal, shinyFeedback, shinyglide, shinyInvoice, ShinyItemAnalysis, shinyjqui, shinyjs, ShinyLink, shinyloadtest, shinylogs, shinyLottie, shinymanager, shinymeta, shinyMixR, shinyML, shinyMobile, shinymodels, shinyNotes, shinyobjects, shinyPredict, shinyQueryBuilder, shinyquiz, shinyrecipes, shinyreforms, shinyservicebot, shinySIR, shinystan, shinyStorePlus, shinysurveys, shinyTempSignal, shinytest, shinyvalidate, shinyWGD, shopifyadsR, shoredate, ShortForm, shortIRT, showtext, shrink, shrinkTVP, SI, SIAMCAT, SIAtools, SIBER, sicegar, sidrar, Sie2nts, siebanxicor, sift, sigFeature, SightabilityModel, sights, sigminer, sigmoid, SignacX, signalHsmm, signatureSearch, signatureSearchData, signeR, signnet, signs, sigQC, sigr, SigsPack, SIHR, siie, siland, silicate, SillyPutty, sim.BA, Sim.DiffProc, sim1000G, sim2Dpredictr, SimBenchData, SimBu, simcdm, SimCorMultRes, SimCorrMix, simcross, SIMD, simDAG, simdata, SimDesign, simDNAmixtures, SimEngine, SimEUCartelLaw, simfam, simfinapi, simglm, simhelpers, SIMICO, simIDM, similaRpeak, SimInf, simitation, simITS, simlandr, SIMle, simmer, simmer.bricks, simmer.plot, simmr, SIMMS, SimMultiCorrData, SimNPH, simode, simodels, simphony, simPIC, simplace, simpleCache, simplecolors, simpleMH, simplePHENOTYPES, simpleRCache, simpletex, simplextree, simplifyEnrichment, SimplyAgree, SIMplyBee, simpr, simputation, simr, SimRDS, simrec, SimReg, simRestore, sims, SimSST, simstandard, simStateSpace, simstudy, simsurv, SimSurvey, simtimer, simTool, simtrait, simtrial, simts, simulator, sinaplot, sinew, singcar, SingleCaseES, SingleCellAlleleExperiment, SingleCellExperiment, singleCellHaystack, SingleCellMultiModal, SingleCellSignalR, SingleMoleculeFootprinting, SingleMoleculeFootprintingData, SingleR, singleRcapture, singR, singscore, SiPhyNetwork, SiPSiC, siren, SIRthresholded, sitadela, sitar, sitePath, sitepickR, SITH, sitmo, sitree, sivirep, sizeMat, sjlabelled, sjmisc, sjPlot, sjSDM, 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soiltestcorr, solartime, solrad, solrium, SomaDataIO, SomaScan.db, SOMbrero, sommer, somspace, SongEvo, sonicscrewdriver, sorocs, sortable, SortedEffects, sorvi, sos, sotkanet, soundClass, SoundShape, SoupX, sovereign, sp, SpaceMarkers, spacesRGB, spacesXYZ, spacetime, SpaCOAP, spacyr, spAddins, SpaDES, SpaDES.core, SpaDES.tools, spaero, spam, Spaniel, SpaNorm, spant, spark.sas7bdat, sparkline, sparklyr.flint, SPARRAfairness, sparrow, SparseArray, SparseDC, sparseDFM, sparseEigen, SparseFunClust, sparsegl, sparseIndexTracking, sparseMatrixStats, SparseMDC, SPARSEMODr, SparseMSE, sparsenetgls, sparseR, sparsevar, sparsevctrs, SparseVFC, sparta, SPARTAAS, sparvaride, SPAS, spaSim, spatgeom, SpatGRID, spaths, SpatialBSS, SpatialCPie, SpatialDatasets, SpatialDDLS, spatialDE, SpatialDecon, spatialDmelxsim, SpatialEpi, SpatialExperiment, SpatialFeatureExperiment, SpatialGEV, spatialHeatmap, spatialising, SpatialKDE, spatialLIBD, SpatialOmicsOverlay, SpatialPOP, SpatialPosition, SpatialRDD, 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Reverse enhances: dygraphs

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