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TCGAretriever: Retrieve Genomic and Clinical Data from CBioPortal Including TCGA Data

The Cancer Genome Atlas (TCGA) is a program aimed at improving our understanding of Cancer Biology. Several TCGA Datasets are available online. 'TCGAretriever' helps accessing and downloading TCGA data hosted on 'cBioPortal' via its Web Interface (see <https://www.cbioportal.org/> for more information).

Version: 1.9.1
Depends: R (≥ 3.5.0)
Imports: httr, reshape2, jsonlite
Suggests: stats, utils, knitr, rmarkdown, ggplot2, dplyr
Published: 2024-01-23
DOI: 10.32614/CRAN.package.TCGAretriever
Author: Damiano Fantini
Maintainer: Damiano Fantini <damiano.fantini at gmail.com>
License: GPL-3
URL: https://www.data-pulse.com/dev_site/TCGAretriever/
NeedsCompilation: no
In views: Omics
CRAN checks: TCGAretriever results

Documentation:

Reference manual: TCGAretriever.pdf
Vignettes: Getting Started with TCGAretriever

Downloads:

Package source: TCGAretriever_1.9.1.tar.gz
Windows binaries: r-devel: TCGAretriever_1.9.1.zip, r-release: TCGAretriever_1.9.1.zip, r-oldrel: TCGAretriever_1.9.1.zip
macOS binaries: r-release (arm64): TCGAretriever_1.9.1.tgz, r-oldrel (arm64): TCGAretriever_1.9.1.tgz, r-release (x86_64): TCGAretriever_1.9.1.tgz, r-oldrel (x86_64): TCGAretriever_1.9.1.tgz
Old sources: TCGAretriever archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=TCGAretriever to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.