leiden: R Implementation of Leiden Clustering Algorithm

Implements the 'Python leidenalg' module to be called in R. Enables clustering using the leiden algorithm for partition a graph into communities. See the 'Python' repository for more details: <https://github.com/vtraag/leidenalg> Traag et al (2018) From Louvain to Leiden: guaranteeing well-connected communities. <doi:10.48550/arXiv.1810.08473>.

Version:	0.4.3.1
Imports:	methods, reticulate, Matrix, igraph (≥ 1.2.7)
Suggests:	bipartite, covr, data.table, devtools, graphsim, knitr, markdown, multiplex, multinet, network, qpdf, RColorBrewer, remotes, rmarkdown, spelling, testthat, tibble
Published:	2023-11-17
DOI:	10.32614/CRAN.package.leiden
Author:	S. Thomas Kelly [aut, cre, trl], Vincent A. Traag [com]
Maintainer:	S. Thomas Kelly <tomkellygenetics at gmail.com>
BugReports:	https://github.com/TomKellyGenetics/leiden/issues
License:	GPL-3 | file LICENSE
URL:	https://github.com/TomKellyGenetics/leiden
NeedsCompilation:	no
Language:	en-US
Citation:	leiden citation info
Materials:	NEWS
CRAN checks:	leiden results

Documentation:

Reference manual:	leiden.pdf
Vignettes:	Benchmarking the Leiden algorithm Running the Leiden algorithm with R on bipartite graphs Running the Leiden algorithm with R on Graph Objects Running the Leiden algorithm with R on adjacency matrices Running the Leiden algorithm with R on multiplex graphs

Downloads:

Package source:	leiden_0.4.3.1.tar.gz
Windows binaries:	r-devel: leiden_0.4.3.1.zip, r-release: leiden_0.4.3.1.zip, r-oldrel: leiden_0.4.3.1.zip
macOS binaries:	r-release (arm64): leiden_0.4.3.1.tgz, r-oldrel (arm64): leiden_0.4.3.1.tgz, r-release (x86_64): leiden_0.4.3.1.tgz, r-oldrel (x86_64): leiden_0.4.3.1.tgz
Old sources:	leiden archive

Reverse dependencies:

Reverse imports:	RaceID, Seurat
Reverse suggests:	FCPS, MOSim

Linking:

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