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SIMMS: Subnetwork Integration for Multi-Modal Signatures

Algorithms to create prognostic biomarkers using biological genesets or networks.

Version: 1.3.2
Depends: R (≥ 3.2.0), survival (≥ 2.36-2), MASS (≥ 7.3-12), glmnet (≥ 1.9-8), doParallel (≥ 1.0.10), foreach (≥ 1.4.3)
Imports: randomForestSRC (≥ 2.9.1)
Suggests: knitr (≥ 1.4), rmarkdown (≥ 0.9.5), xtable (≥ 1.7-4)
Published: 2022-04-24
DOI: 10.32614/CRAN.package.SIMMS
Author: Syed Haider [aut, cre], Paul C. Boutros [aut], Michal Grzadkowski [ctb]
Maintainer: Syed Haider <Syed.Haider at icr.ac.uk>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
In views: Omics
CRAN checks: SIMMS results

Documentation:

Reference manual: SIMMS.pdf
Vignettes: SIMMS

Downloads:

Package source: SIMMS_1.3.2.tar.gz
Windows binaries: r-devel: SIMMS_1.3.2.zip, r-release: SIMMS_1.3.2.zip, r-oldrel: SIMMS_1.3.2.zip
macOS binaries: r-release (arm64): SIMMS_1.3.2.tgz, r-oldrel (arm64): SIMMS_1.3.2.tgz, r-release (x86_64): SIMMS_1.3.2.tgz, r-oldrel (x86_64): SIMMS_1.3.2.tgz
Old sources: SIMMS archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=SIMMS to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.