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Differential analysis of tumor tissue immune cell type abundance based on RNA-seq gene-level expression from The Cancer Genome Atlas (TCGA; <https://pancanatlas.xenahubs.net>) database.
| Version: | 1.0.2 |
| Depends: | R (≥ 2.10) |
| Imports: | config, data.table, dplyr, DT, ggplot2, ggpubr, golem, grDevices, magrittr, methods, plotly, readr, reshape2, rlang, rstatix, scales, shiny, shinyFeedback, shinyjs, stats, stringr, tidyr, tidyselect, utils |
| Suggests: | covr, knitr, rmarkdown, spelling, testthat |
| Published: | 2023-04-04 |
| DOI: | 10.32614/CRAN.package.tcgaViz |
| Author: | Etienne Camenen [aut, cre], Gilles Marodon [aut], Nicolas Aubert [aut] |
| Maintainer: | Etienne Camenen <etienne.camenen at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | README |
| CRAN checks: | tcgaViz results |
| Reference manual: | tcgaViz.pdf |
| Vignettes: |
Tutorial |
| Package source: | tcgaViz_1.0.2.tar.gz |
| Windows binaries: | r-devel: tcgaViz_1.0.2.zip, r-release: tcgaViz_1.0.2.zip, r-oldrel: tcgaViz_1.0.2.zip |
| macOS binaries: | r-release (arm64): tcgaViz_1.0.2.tgz, r-oldrel (arm64): tcgaViz_1.0.2.tgz, r-release (x86_64): tcgaViz_1.0.2.tgz, r-oldrel (x86_64): tcgaViz_1.0.2.tgz |
| Old sources: | tcgaViz archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.