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joineR: Joint Modelling of Repeated Measurements and Time-to-Event Data

Analysis of repeated measurements and time-to-event data via random effects joint models. Fits the joint models proposed by Henderson and colleagues <doi:10.1093/biostatistics/1.4.465> (single event time) and by Williamson and colleagues (2008) <doi:10.1002/sim.3451> (competing risks events time) to a single continuous repeated measure. The time-to-event data is modelled using a (cause-specific) Cox proportional hazards regression model with time-varying covariates. The longitudinal outcome is modelled using a linear mixed effects model. The association is captured by a latent Gaussian process. The model is estimated using am Expectation Maximization algorithm. Some plotting functions and the variogram are also included. This project is funded by the Medical Research Council (Grant numbers G0400615 and MR/M013227/1).

Version: 1.2.8
Depends: R (≥ 3.6), survival
Imports: graphics, lattice, MASS, nlme, statmod, stats, utils
Suggests: knitr, rmarkdown, testthat, covr
Published: 2023-01-22
DOI: 10.32614/CRAN.package.joineR
Author: Pete Philipson ORCID iD [aut], Ines Sousa ORCID iD [aut], Peter J. Diggle ORCID iD [aut], Paula Williamson ORCID iD [aut], Ruwanthi Kolamunnage-Dona ORCID iD [aut], Robin Henderson [aut], Graeme L. Hickey ORCID iD [aut, cre], Maria Sudell [ctb], Medical Research Council [fnd] (Grant numbers: G0400615 and MR/M013227/1)
Maintainer: Graeme L. Hickey <graemeleehickey at gmail.com>
BugReports: https://github.com/graemeleehickey/joineR/issues
License: GPL-3 | file LICENSE
URL: https://github.com/graemeleehickey/joineR/
NeedsCompilation: no
Citation: joineR citation info
Materials: README NEWS
In views: Survival
CRAN checks: joineR results

Documentation:

Reference manual: joineR.pdf
Vignettes: Competing risks
joineR

Downloads:

Package source: joineR_1.2.8.tar.gz
Windows binaries: r-devel: joineR_1.2.8.zip, r-release: joineR_1.2.8.zip, r-oldrel: joineR_1.2.8.zip
macOS binaries: r-release (arm64): joineR_1.2.8.tgz, r-oldrel (arm64): joineR_1.2.8.tgz, r-release (x86_64): joineR_1.2.8.tgz, r-oldrel (x86_64): joineR_1.2.8.tgz
Old sources: joineR archive

Reverse dependencies:

Reverse suggests: joineRML

Linking:

Please use the canonical form https://CRAN.R-project.org/package=joineR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.