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lfc: Log Fold Change Distribution Tools for Working with Ratios of Counts

Ratios of count data such as obtained from RNA-seq are modelled using Bayesian statistics to derive posteriors for effects sizes. This approach is described in Erhard & Zimmer (2015) <doi:10.1093/nar/gkv696> and Erhard (2018) <doi:10.1093/bioinformatics/bty471>.

Version: 0.2.3
Imports: stats
Suggests: knitr, rmarkdown, DESeq2, SummarizedExperiment
Published: 2023-04-19
DOI: 10.32614/CRAN.package.lfc
Author: Florian Erhard
Maintainer: Florian Erhard <florian.erhard at uni-wuerzburg.de>
BugReports: https://github.com/erhard-lab/lfc/issues
License: Apache License (≥ 2)
URL: https://github.com/erhard-lab/lfc
NeedsCompilation: no
Materials: README
CRAN checks: lfc results

Documentation:

Reference manual: lfc.pdf
Vignettes: Using LFC

Downloads:

Package source: lfc_0.2.3.tar.gz
Windows binaries: r-devel: lfc_0.2.3.zip, r-release: lfc_0.2.3.zip, r-oldrel: lfc_0.2.3.zip
macOS binaries: r-release (arm64): lfc_0.2.3.tgz, r-oldrel (arm64): lfc_0.2.3.tgz, r-release (x86_64): lfc_0.2.3.tgz, r-oldrel (x86_64): lfc_0.2.3.tgz
Old sources: lfc archive

Reverse dependencies:

Reverse imports: grandR

Linking:

Please use the canonical form https://CRAN.R-project.org/package=lfc to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.