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A tool for simulating rhythmic data: transcriptome data using Gaussian or negative binomial distributions, and behavioral activity data using Bernoulli or Poisson distributions. See Singer et al. (2019) <doi:10.7717/peerj.6985>.
| Version: | 1.0.3 |
| Depends: | R (≥ 3.4) |
| Imports: | data.table (≥ 1.11.4), foreach (≥ 1.4.4) |
| Suggests: | ggplot2 (≥ 3.0.0), kableExtra (≥ 0.9.0), knitr (≥ 1.20), limma (≥ 3.34.9), precrec (≥ 0.9.1), rmarkdown (≥ 1.9), testthat (≥ 2.0.0) |
| Published: | 2022-08-09 |
| DOI: | 10.32614/CRAN.package.simphony |
| Author: | Jake Hughey [aut, cre], Jordan Singer [aut], Darwin Fu [ctb] |
| Maintainer: | Jake Hughey <jakejhughey at gmail.com> |
| License: | GPL-2 |
| URL: | https://simphony.hugheylab.org, https://github.com/hugheylab/simphony |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | simphony results |
| Reference manual: | simphony.pdf |
| Vignettes: |
Using simphony's various options Using simphony to evaluate rhythm detection |
| Package source: | simphony_1.0.3.tar.gz |
| Windows binaries: | r-devel: simphony_1.0.3.zip, r-release: simphony_1.0.3.zip, r-oldrel: simphony_1.0.3.zip |
| macOS binaries: | r-release (arm64): simphony_1.0.3.tgz, r-oldrel (arm64): simphony_1.0.3.tgz, r-release (x86_64): simphony_1.0.3.tgz, r-oldrel (x86_64): simphony_1.0.3.tgz |
| Old sources: | simphony archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.