The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
Reversion mutations are secondary mutations that reverse the deleterious effects of an original pathogenic mutation, partially or fully restoring the gene's function. The revert package detects reversion mutations for a specific pathogenic mutation from DNA-seq bam files.
| Version: | 1.0.0 |
| Depends: | R (≥ 4.4.0) |
| Imports: | BSgenome, BiocGenerics, Biostrings, GenomeInfoDb, GenomicRanges, IRanges, Rsamtools, S4Vectors, ensembldb, pwalign, stats, utils |
| Suggests: | knitr, rmarkdown, futile.logger, BSgenome.Hsapiens.UCSC.hg19, EnsDb.Hsapiens.v75, BSgenome.Hsapiens.UCSC.hg38, EnsDb.Hsapiens.v86 |
| Published: | 2025-12-17 |
| DOI: | 10.32614/CRAN.package.revert |
| Author: | Hui Xiao [aut, cre], Stephen Pettitt [aut], Syed Haider [aut] |
| Maintainer: | Hui Xiao <hui.xiao at icr.ac.uk> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | revert results |
| Reference manual: | revert.html , revert.pdf |
| Vignettes: |
help (source, R code) |
| Package source: | revert_1.0.0.tar.gz |
| Windows binaries: | r-devel: revert_1.0.0.zip, r-release: revert_1.0.0.zip, r-oldrel: revert_1.0.0.zip |
| macOS binaries: | r-release (arm64): revert_1.0.0.tgz, r-oldrel (arm64): revert_1.0.0.tgz, r-release (x86_64): revert_1.0.0.tgz, r-oldrel (x86_64): not available |
| Old sources: | revert archive |
Please use the canonical form https://CRAN.R-project.org/package=revert to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.