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Provides tools for cleaning, processing, and preparing microbiome sequencing data (e.g., 16S rRNA) for downstream analysis. Supports CSV, TXT, and 'Excel' file formats. The main function, ezclean(), automates microbiome data transformation, including format validation, transposition, numeric conversion, and metadata integration. Also ensures efficient handling of taxonomic levels, resolves duplicated taxa entries, and outputs a well-structured, analysis-ready dataset.
| Version: | 0.1.3 |
| Imports: | tools, readxl, openxlsx, dplyr, tidyr, ggplot2 |
| Suggests: | knitr, rmarkdown |
| Published: | 2025-03-03 |
| DOI: | 10.32614/CRAN.package.mbX |
| Author: | Utsav Lamichhane [aut, cre] |
| Maintainer: | Utsav Lamichhane <utsav.lamichhane at gmail.com> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | mbX results |
| Reference manual: | mbX.pdf |
| Vignettes: |
mbX Vignette (source) |
| Package source: | mbX_0.1.3.tar.gz |
| Windows binaries: | r-devel: mbX_0.1.3.zip, r-release: mbX_0.1.3.zip, r-oldrel: mbX_0.1.3.zip |
| macOS binaries: | r-devel (arm64): mbX_0.1.3.tgz, r-release (arm64): mbX_0.1.3.tgz, r-oldrel (arm64): mbX_0.1.3.tgz, r-devel (x86_64): mbX_0.1.3.tgz, r-release (x86_64): mbX_0.1.3.tgz, r-oldrel (x86_64): mbX_0.1.3.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.