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A fast, interactive cross-platform, and easy to share 'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or 'AFNI/SUMA' surfaces. The viewer widget can be either standalone or embedded into 'R-shiny' applications. The standalone version only require a web browser with 'WebGL2' support (for example, 'Chrome', 'Firefox', 'Safari'), and can be inserted into any websites. The 'R-shiny' support allows the 3D viewer to be dynamically generated from reactive user inputs. Please check the publication by Wang, Magnotti, Zhang, and Beauchamp (2023, <doi:10.1523/ENEURO.0328-23.2023>) for electrode localization. This viewer has been fully adopted by 'RAVE' <https://openwetware.org/wiki/RAVE>, an interactive toolbox to analyze 'iEEG' data by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>). Please check 'citation("threeBrain")' for details.
| Version: | 1.2.0 |
| Imports: | utils, grDevices, graphics, dipsaus, xml2, servr, png, knitr, shiny (≥ 1.2.0), digest (≥ 0.6.22), freesurferformats (≥ 0.1.7), jsonlite (≥ 1.5), stringr (≥ 1.3.1), htmlwidgets (≥ 1.3), R6 (≥ 2.3.0), gifti (≥ 0.7.5), oro.nifti (≥ 0.9.1) |
| Suggests: | rmarkdown, DT, ravetools, htmltools |
| Published: | 2024-11-07 |
| DOI: | 10.32614/CRAN.package.threeBrain |
| Author: | Zhengjia Wang [aut, cre, cph], John Magnotti [ctb, res], Xiang Zhang [ctb, res], Brian Metzger [res], Elizabeth Nesbitt [res], Meng Li [ths], Michael Beauchamp [ths, ctb, dtc] |
| Maintainer: | Zhengjia Wang <dipterix.wang at gmail.com> |
| BugReports: | https://github.com/dipterix/threeBrain/issues |
| License: | MPL-2.0 |
| URL: | https://dipterix.org/threeBrain/, https://github.com/dipterix/threeBrain |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | threeBrain citation info |
| Materials: | NEWS |
| CRAN checks: | threeBrain results |
| Reference manual: | threeBrain.pdf |
| Vignettes: |
Getting Started (source, R code) Data Visualization (Electrodes) (source, R code) |
| Package source: | threeBrain_1.2.0.tar.gz |
| Windows binaries: | r-devel: threeBrain_1.2.0.zip, r-release: threeBrain_1.2.0.zip, r-oldrel: threeBrain_1.2.0.zip |
| macOS binaries: | r-release (arm64): threeBrain_1.2.0.tgz, r-oldrel (arm64): threeBrain_1.2.0.tgz, r-release (x86_64): threeBrain_1.2.0.tgz, r-oldrel (x86_64): threeBrain_1.2.0.tgz |
| Old sources: | threeBrain archive |
Please use the canonical form https://CRAN.R-project.org/package=threeBrain to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.