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MuPETFlow: Multiple Ploidy Estimation Tool for all Species Compatible with
Flow Cytometry
A graphical user interface tool to estimate ploidy from DNA cells stained with fluorescent dyes and analyzed by flow cytometry, following the methodology of Gómez-Muñoz and Fischer (2024) <doi:10.1101/2024.01.24.577056>. Features include multiple file uploading and configuration, peak fluorescence intensity detection, histogram visualizations, peak error curation, ploidy and genome size calculations, and easy results export.
| Version: |
0.1.0 |
| Imports: |
BiocManager, dplyr, DT, flowCore, ggplot2, ggrepel, gridExtra, markdown, shiny, shinythemes, tidyr, zoo |
| Suggests: |
knitr, rmarkdown |
| Published: |
2025-01-07 |
| DOI: |
10.32614/CRAN.package.MuPETFlow |
| Author: |
Cintia Gómez-Muñoz
 [aut, cre],
Gilles Fischer
[aut] |
| Maintainer: |
Cintia Gómez-Muñoz <cintia.gomez_munoz at sorbonne-universite.fr> |
| License: |
GPL (≥ 3) |
| NeedsCompilation: |
no |
| Materials: |
README |
| CRAN checks: |
MuPETFlow results [issues need fixing before 2025-01-23] |
Documentation:
Downloads:
Linking:
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https://CRAN.R-project.org/package=MuPETFlow
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.