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Genomic biology is not limited to the confines of the canonical B-forming DNA duplex, but includes over ten different types of other secondary structures that are collectively termed non-B DNA structures. Of these non-B DNA structures, the G-quadruplexes are highly stable four-stranded structures that are recognized by distinct subsets of nuclear factors. This package provide functions for predicting intramolecular G quadruplexes. In addition, functions for predicting other intramolecular nonB DNA structures are included.
| Version: | 2.1-2 |
| Depends: | R (≥ 4.2.0) |
| Imports: | ape (≥ 5.6-2), seqinr (≥ 4.2-23) |
| Suggests: | knitr, rmarkdown |
| Published: | 2022-11-29 |
| DOI: | 10.32614/CRAN.package.gquad |
| Author: | Hannah O. Ajoge |
| Maintainer: | Hannah O. Ajoge <ohuajo at gmail.com> |
| License: | Artistic-2.0 |
| NeedsCompilation: | no |
| CRAN checks: | gquad results |
| Reference manual: | gquad.pdf |
| Vignettes: |
Manuscript |
| Package source: | gquad_2.1-2.tar.gz |
| Windows binaries: | r-devel: gquad_2.1-2.zip, r-release: gquad_2.1-2.zip, r-oldrel: gquad_2.1-2.zip |
| macOS binaries: | r-release (arm64): gquad_2.1-2.tgz, r-oldrel (arm64): gquad_2.1-2.tgz, r-release (x86_64): gquad_2.1-2.tgz, r-oldrel (x86_64): gquad_2.1-2.tgz |
| Old sources: | gquad archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.