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rbioapi: User-Friendly R Interface to Biologic Web Services' API

Currently fully supports Enrichr, JASPAR, miEAA, PANTHER, Reactome, STRING, and UniProt! The goal of rbioapi is to provide a user-friendly and consistent interface to biological databases and services. In a way that insulates the user from the technicalities of using web services API and creates a unified and easy-to-use interface to biological and medical web services. This is an ongoing project; New databases and services will be added periodically. Feel free to suggest any databases or services you often use.

Version: 0.8.1
Imports: httr, jsonlite, utils
Suggests: DT, knitr, png, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-03-30
DOI: 10.32614/CRAN.package.rbioapi
Author: Moosa Rezwani ORCID iD [aut, cre]
Maintainer: Moosa Rezwani <moosa.rezwani at gmail.com>
BugReports: https://github.com/moosa-r/rbioapi/issues
License: GPL-3
URL: https://rbioapi.moosa-r.com, https://github.com/moosa-r/rbioapi
NeedsCompilation: no
Citation: rbioapi citation info
Materials: NEWS
CRAN checks: rbioapi results

Documentation:

Reference manual: rbioapi.pdf
Vignettes: 1: rbioapi: User-Friendly R Interface to Biologic Web Services' API
3.A: Do with rbioapi: Enrichment (Over-Representation) Analysis in R
2.A: Enrichr & rbioapi
2.B: JASPAR & rbioapi
2.C: miEEA & rbioapi
2.D: PANTHER & rbioapi
2.E: Reactome & rbioapi
2.F: STRING & rbioapi
2.G: UniProt & rbioapi

Downloads:

Package source: rbioapi_0.8.1.tar.gz
Windows binaries: r-devel: rbioapi_0.8.1.zip, r-release: rbioapi_0.8.1.zip, r-oldrel: rbioapi_0.8.1.zip
macOS binaries: r-release (arm64): rbioapi_0.8.1.tgz, r-oldrel (arm64): rbioapi_0.8.1.tgz, r-release (x86_64): rbioapi_0.8.1.tgz, r-oldrel (x86_64): rbioapi_0.8.1.tgz
Old sources: rbioapi archive

Reverse dependencies:

Reverse suggests: GRaNIE

Linking:

Please use the canonical form https://CRAN.R-project.org/package=rbioapi to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.