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The Common Workflow Language <https://www.commonwl.org/> is an open standard for describing data analysis workflows. This package takes the raw Common Workflow Language workflows encoded in JSON or 'YAML' and turns the workflow elements into tidy data frames or lists. A graph representation for the workflow can be constructed and visualized with the parsed workflow inputs, outputs, and steps. Users can embed the visualizations in their 'Shiny' applications, and export them as HTML files or static images.
Version: | 1.0.7 |
Imports: | jsonlite, yaml, dplyr, magrittr, visNetwork, htmlwidgets, webshot |
Suggests: | knitr, rmarkdown, shiny |
Published: | 2022-05-03 |
DOI: | 10.32614/CRAN.package.tidycwl |
Author: | Soner Koc [aut, cre], Jeffrey Grover [aut], Nan Xiao [aut], Dennis Dean [aut], Seven Bridges Genomics [cph, fnd] |
Maintainer: | Soner Koc <soner.koc at sevenbridges.com> |
BugReports: | https://github.com/sbg/tidycwl/issues |
License: | AGPL-3 |
URL: | https://sbg.github.io/tidycwl/, https://github.com/sbg/tidycwl |
NeedsCompilation: | no |
SystemRequirements: | PhantomJS (https://phantomjs.org), pandoc (>= 1.12.3) - https://pandoc.org. |
Materials: | README NEWS |
CRAN checks: | tidycwl results |
Reference manual: | tidycwl.pdf |
Vignettes: |
A Grammar for Tidying CWL Workflows |
Package source: | tidycwl_1.0.7.tar.gz |
Windows binaries: | r-devel: tidycwl_1.0.7.zip, r-release: tidycwl_1.0.7.zip, r-oldrel: tidycwl_1.0.7.zip |
macOS binaries: | r-release (arm64): tidycwl_1.0.7.tgz, r-oldrel (arm64): tidycwl_1.0.7.tgz, r-release (x86_64): tidycwl_1.0.7.tgz, r-oldrel (x86_64): tidycwl_1.0.7.tgz |
Old sources: | tidycwl archive |
Please use the canonical form https://CRAN.R-project.org/package=tidycwl to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.