Rnaught: Estimate the Basic Reproduction Number (R0)

A collection of methods for estimating the basic reproduction number (R0) of infectious diseases. Features a web application to interface with the estimators. Uses the models from: Fisman et al. (2013) <doi:10.1371/journal.pone.0083622>, Bettencourt and Ribeiro (2008) <doi:10.1371/journal.pone.0002185>, and White and Pagano (2008) <doi:10.1002/sim.3136>. Includes datasets for Canadian national and provincial COVID-19 case counts provided by Berry et al. (2021) <doi:10.1038/s41597-021-00955-2>.

Version:	0.1.0
Depends:	R (≥ 2.10)
Imports:	stats, utils
Suggests:	knitr, rmarkdown, shiny, bslib, DT, plotly, testthat (≥ 3.0.0)
Published:	2025-09-02
DOI:	10.32614/CRAN.package.Rnaught
Author:	Naeem Model [aut, cph, cre], Sawitree Boonpatcharanon [aut, cph], Jane Heffernan [aut, cph], Hanna Jankowski [aut, cph], Tatiana Krikella [aut, cph], Kseniia Lipikhin [ctb, cph]
Maintainer:	Naeem Model <me at nmode.ca>
BugReports:	https://github.com/MI2YorkU/Rnaught/issues
License:	AGPL (≥ 3)
URL:	https://mi2yorku.github.io/Rnaught/, https://github.com/MI2YorkU/Rnaught
NeedsCompilation:	no
Citation:	Rnaught citation info
Materials:	README, NEWS
CRAN checks:	Rnaught results

Documentation:

Reference manual:	Rnaught.html , Rnaught.pdf
Vignettes:	Introduction to Rnaught (source, R code) Sequential Bayes: Utilizing the Posterior Distribution (source, R code) White and Pagano: Utilizing the Serial Distribution (source, R code)

Downloads:

Package source:	Rnaught_0.1.0.tar.gz
Windows binaries:	r-devel: Rnaught_0.1.0.zip, r-release: Rnaught_0.1.0.zip, r-oldrel: Rnaught_0.1.0.zip
macOS binaries:	r-release (arm64): Rnaught_0.1.0.tgz, r-oldrel (arm64): Rnaught_0.1.0.tgz, r-release (x86_64): Rnaught_0.1.0.tgz, r-oldrel (x86_64): Rnaught_0.1.0.tgz

Linking:

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