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MicrobialGrowth: Estimates Growth Parameters from Models and Plots the Curve

Fit growth curves to various known microbial growth models automatically to estimate growth parameters. Growth curves can be plotted with their uncertainty band. Growth models are: modified Gompertz model (Zwietering et al. (1990) <doi:10.1128/aem.56.6.1875-1881.1990>), Baranyi model (Baranyi and Roberts (1994) <doi:10.1016/0168-1605%2894%2990157-0>), Rosso model (Rosso et al. (1993) <doi:10.1006/jtbi.1993.1099>) and linear model (Dantigny (2005) <doi:10.1016/j.ijfoodmicro.2004.10.013>).

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: graphics, grDevices, methods, nlstools, stats, utils
Suggests: knitr, rmarkdown
Published: 2025-03-10
DOI: 10.32614/CRAN.package.MicrobialGrowth
Author: Florentin L'Homme ORCID iD [aut, cre], Clarisse Breard ORCID iD [aut]
Maintainer: Florentin L'Homme <florentin.lhomme at gmail.com>
License: GPL (≥ 3)
NeedsCompilation: no
CRAN checks: MicrobialGrowth results

Documentation:

Reference manual: MicrobialGrowth.pdf
Vignettes: MicrobialGrowth (source, R code)

Downloads:

Package source: MicrobialGrowth_1.0.0.tar.gz
Windows binaries: r-devel: MicrobialGrowth_1.0.0.zip, r-release: MicrobialGrowth_1.0.0.zip, r-oldrel: MicrobialGrowth_1.0.0.zip
macOS binaries: r-devel (arm64): MicrobialGrowth_1.0.0.tgz, r-release (arm64): MicrobialGrowth_1.0.0.tgz, r-oldrel (arm64): MicrobialGrowth_1.0.0.tgz, r-devel (x86_64): MicrobialGrowth_1.0.0.tgz, r-release (x86_64): MicrobialGrowth_1.0.0.tgz, r-oldrel (x86_64): MicrobialGrowth_1.0.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.