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fishtree: Interface to the Fish Tree of Life API

An interface to the Fish Tree of Life API to download taxonomies, phylogenies, fossil calibrations, and diversification rate information for ray-finned fishes.

Version: 0.3.4
Depends: R (≥ 4.0)
Imports: ape (≥ 5.2), jsonlite (≥ 1.5), memoise, parallel, rlang (≥ 0.4.1), utils
Suggests: diversitree, geiger, hisse (≥ 1.9.10), knitr, markdown, phytools, picante, rfishbase, rmarkdown, spelling, testthat
Published: 2021-01-31
DOI: 10.32614/CRAN.package.fishtree
Author: Jonathan Chang ORCID iD [aut, cre], Michael E Alfaro [ctb], Daniel L Rabosky [ctb], Stephen A Smith [ctb]
Maintainer: Jonathan Chang <me at jonathanchang.org>
BugReports: https://github.com/jonchang/fishtree/issues
License: BSD_2_clause + file LICENSE
URL: https://fishtreeoflife.org/, https://github.com/jonchang/fishtree
NeedsCompilation: no
Language: en-US
Citation: fishtree citation info
Materials: README NEWS
CRAN checks: fishtree results

Documentation:

Reference manual: fishtree.pdf
Vignettes: Phylogenetic community assembly with the Fish Tree of Life
A simple comparative analysis with the Fish Tree of Life

Downloads:

Package source: fishtree_0.3.4.tar.gz
Windows binaries: r-devel: fishtree_0.3.4.zip, r-release: fishtree_0.3.4.zip, r-oldrel: fishtree_0.3.4.zip
macOS binaries: r-release (arm64): fishtree_0.3.4.tgz, r-oldrel (arm64): fishtree_0.3.4.tgz, r-release (x86_64): fishtree_0.3.4.tgz, r-oldrel (x86_64): fishtree_0.3.4.tgz
Old sources: fishtree archive

Reverse dependencies:

Reverse imports: FishPhyloMaker
Reverse suggests: phylosem

Linking:

Please use the canonical form https://CRAN.R-project.org/package=fishtree to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.