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This is a tidy implementation for heatmap. At the moment it is based on the (great) package 'ComplexHeatmap'. The goal of this package is to interface a tidy data frame with this powerful tool. Some of the advantages are: Row and/or columns colour annotations are easy to integrate just specifying one parameter (column names). Custom grouping of rows is easy to specify providing a grouped tbl. For example: df %>% group_by(...). Labels size adjusted by row and column total number. Default use of Brewer and Viridis palettes.
| Version: | 1.8.1 |
| Depends: | R (≥ 3.6) |
| Imports: | methods, stats, utils, dplyr (≥ 0.8.5), magrittr (≥ 1.5), tidyr (≥ 1.0.3), rlang (≥ 0.4.5), purrr (≥ 0.3.3), tibble, ComplexHeatmap (≥ 2.2.0), viridis (≥ 0.5.1), circlize (≥ 0.4.8), RColorBrewer (≥ 1.1), grid, grDevices, lifecycle (≥ 0.2.0), dendextend, patchwork |
| Suggests: | spelling, testthat, vdiffr, BiocManager, knitr, rmarkdown, qpdf, covr, roxygen2, forcats, ggplot2 |
| Published: | 2022-05-20 |
| DOI: | 10.32614/CRAN.package.tidyHeatmap |
| Author: | Stefano Mangiola [aut, cre], Anthony Papenfuss [ctb] |
| Maintainer: | Stefano Mangiola <mangiolastefano at gmail.com> |
| BugReports: | https://github.com/stemangiola/tidyHeatmap |
| License: | GPL-3 |
| URL: | https://www.r-project.org, https://github.com/stemangiola/tidyHeatmap |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | tidyHeatmap citation info |
| Materials: | README |
| CRAN checks: | tidyHeatmap results |
| Reference manual: | tidyHeatmap.pdf |
| Vignettes: |
Overview of the tidyHeatmap package |
| Package source: | tidyHeatmap_1.8.1.tar.gz |
| Windows binaries: | r-devel: tidyHeatmap_1.8.1.zip, r-release: tidyHeatmap_1.8.1.zip, r-oldrel: tidyHeatmap_1.8.1.zip |
| macOS binaries: | r-release (arm64): tidyHeatmap_1.8.1.tgz, r-oldrel (arm64): tidyHeatmap_1.8.1.tgz, r-release (x86_64): tidyHeatmap_1.8.1.tgz, r-oldrel (x86_64): tidyHeatmap_1.8.1.tgz |
| Old sources: | tidyHeatmap archive |
| Reverse imports: | Moonlight2R |
| Reverse suggests: | InteractiveComplexHeatmap, tidybulk, tidySingleCellExperiment |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.