microbiomeMQC: Calculate 4 Key Reporting Measures

Perform calculations for the WHO International Reference Reagents for the microbiome. Using strain, species or genera abundance tables generated through analysis of 16S ribosomal RNA sequencing or shotgun sequencing which included a reference reagent. This package will calculate measures of sensitivity, False positive relative abundance, diversity, and similarity based on mean average abundances with respect to the reference reagent.

Version:	1.0.2
Depends:	R (≥ 3.5.0)
Imports:	readxl, vegan
Suggests:	testthat, knitr, rmarkdown
Published:	2024-09-16
DOI:	10.32614/CRAN.package.microbiomeMQC
Author:	Jacob Dehinsilu [aut, cre], Ravneet Bhuller [aut]
Maintainer:	Jacob Dehinsilu <jacobdehinsilu at outlook.com>
License:	GPL-3
NeedsCompilation:	no
CRAN checks:	microbiomeMQC results

Documentation:

Reference manual:	microbiomeMQC.pdf
Vignettes:	Using microbiomeMQC (source, R code)

Downloads:

Package source:	microbiomeMQC_1.0.2.tar.gz
Windows binaries:	r-devel: microbiomeMQC_1.0.2.zip, r-release: microbiomeMQC_1.0.2.zip, r-oldrel: microbiomeMQC_1.0.2.zip
macOS binaries:	r-release (arm64): microbiomeMQC_1.0.2.tgz, r-oldrel (arm64): microbiomeMQC_1.0.2.tgz, r-release (x86_64): microbiomeMQC_1.0.2.tgz, r-oldrel (x86_64): microbiomeMQC_1.0.2.tgz

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