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gggenomes: A Grammar of Graphics for Comparative Genomics

An extension of 'ggplot2' for creating complex genomic maps. It builds on the power of 'ggplot2' and 'tidyverse' adding new 'ggplot2'-style geoms & positions and 'dplyr'-style verbs to manipulate the underlying data. It implements a layout concept inspired by 'ggraph' and introduces tracks to bring tidiness to the mess that is genomics data.

Version: 1.0.1
Depends: R (≥ 3.4.2), ggplot2 (≥ 3.5.0)
Imports: vctrs, rlang, dplyr, tidyr, readr (≥ 2.0.0), purrr, tibble, stringr, grid, jsonlite, snakecase, magrittr, scales, tidyselect, colorspace, methods, utils, ellipsis
Suggests: testthat, ggtree, patchwork, Hmisc, knitr, ggrepel, IRanges
Published: 2024-08-30
DOI: 10.32614/CRAN.package.gggenomes
Author: Thomas Hackl [aut, cre], Markus J. Ankenbrand [aut], Bart van Adrichem [aut], Kristina Haslinger [ctb, sad]
Maintainer: Thomas Hackl <t.hackl at rug.nl>
BugReports: https://github.com/thackl/gggenomes/issues
License: MIT + file LICENSE
URL: https://github.com/thackl/gggenomes
NeedsCompilation: no
Materials: README
CRAN checks: gggenomes results

Documentation:

Reference manual: gggenomes.pdf
Vignettes: Emales (source, R code)
Flip (source, R code)
Basic Usage (source, R code)

Downloads:

Package source: gggenomes_1.0.1.tar.gz
Windows binaries: r-devel: gggenomes_1.0.1.zip, r-release: gggenomes_1.0.1.zip, r-oldrel: gggenomes_1.0.1.zip
macOS binaries: r-release (arm64): gggenomes_1.0.1.tgz, r-oldrel (arm64): gggenomes_1.0.1.tgz, r-release (x86_64): gggenomes_1.0.1.tgz, r-oldrel (x86_64): gggenomes_1.0.1.tgz
Old sources: gggenomes archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.