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shiftR: Fast Enrichment Analysis via Circular Permutations

Fast enrichment analysis for locally correlated statistics via circular permutations. The analysis can be performed at multiple significance thresholds for both primary and auxiliary data sets with efficient correction for multiple testing.

Version: 1.5
Imports: parallel
Suggests: knitr, rmarkdown, pander
Published: 2019-03-22
DOI: 10.32614/CRAN.package.shiftR
Author: Andrey A Shabalin ORCID iD [aut, cre], Edwin J C G van den Oord [aut]
Maintainer: Andrey A Shabalin <andrey.shabalin at gmail.com>
BugReports: https://github.com/andreyshabalin/shiftR/issues
License: LGPL-3
URL: https://github.com/andreyshabalin/shiftR
NeedsCompilation: yes
CRAN checks: shiftR results

Documentation:

Reference manual: shiftR.pdf
Vignettes: Overview of shiftR package

Downloads:

Package source: shiftR_1.5.tar.gz
Windows binaries: r-devel: shiftR_1.5.zip, r-release: shiftR_1.5.zip, r-oldrel: shiftR_1.5.zip
macOS binaries: r-release (arm64): shiftR_1.5.tgz, r-oldrel (arm64): shiftR_1.5.tgz, r-release (x86_64): shiftR_1.5.tgz, r-oldrel (x86_64): shiftR_1.5.tgz
Old sources: shiftR archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=shiftR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.