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pGRN: Single-Cell RNA Sequencing Pseudo-Time Based Gene Regulatory Network Inference

Inference and visualize gene regulatory network based on single-cell RNA sequencing pseudo-time information.

Version: 0.3.5
Depends: R (≥ 2.10)
Imports: bigmemory, doParallel, dtw, foreach, ggplot2, ggraph, igraph, lmtest, proxy, tidygraph, visNetwork, future
Suggests: knitr, webshot, rmarkdown
Published: 2023-01-17
DOI: 10.32614/CRAN.package.pGRN
Author: Gangcai Xie
Maintainer: Gangcai Xie <gcxiester at gmail.com>
License: MIT + file LICENSE
NeedsCompilation: no
CRAN checks: pGRN results

Documentation:

Reference manual: pGRN.pdf
Vignettes: pGRN

Downloads:

Package source: pGRN_0.3.5.tar.gz
Windows binaries: r-devel: pGRN_0.3.5.zip, r-release: pGRN_0.3.5.zip, r-oldrel: pGRN_0.3.5.zip
macOS binaries: r-release (arm64): pGRN_0.3.5.tgz, r-oldrel (arm64): pGRN_0.3.5.tgz, r-release (x86_64): pGRN_0.3.5.tgz, r-oldrel (x86_64): pGRN_0.3.5.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.