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Provides a pipeline for the comparative analysis of collective movement data (e.g. fish schools, bird flocks, baboon troops) by processing 2-dimensional positional data (x,y,t) from GPS trackers or computer vision tracking systems, discretizing events of collective motion, calculating a set of established metrics that characterize each event, and placing the events in a multi-dimensional swarm space constructed from these metrics. The swarm space concept, the metrics and data sets included are described in: Papadopoulou Marina, Furtbauer Ines, O'Bryan Lisa R., Garnier Simon, Georgopoulou Dimitra G., Bracken Anna M., Christensen Charlotte and King Andrew J. (2023) <doi:10.1098/rstb.2022.0068>.
Version: | 0.1.0 |
Depends: | R (≥ 3.5) |
Imports: | parallel, pbapply, Rtsne, trackdf, swaRm, geosphere |
Suggests: | knitr, rmarkdown, ggplot2, testthat (≥ 3.0.0), covr |
Published: | 2024-03-26 |
DOI: | 10.32614/CRAN.package.swaRmverse |
Author: | Marina Papadopoulou
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Maintainer: | Marina Papadopoulou <m.papadopoulou.rug at gmail.com> |
BugReports: | https://github.com/marinapapa/swaRmverse/issues |
License: | GPL-3 |
URL: | https://marinapapa.github.io/swaRmverse/, https://github.com/marinapapa/swaRmverse |
NeedsCompilation: | no |
Citation: | swaRmverse citation info |
Materials: | README NEWS |
CRAN checks: | swaRmverse results |
Reference manual: | swaRmverse.pdf |
Vignettes: |
1 - Data Preparation 2 - Data Analysis 3 - The Swarm-Verse |
Package source: | swaRmverse_0.1.0.tar.gz |
Windows binaries: | r-devel: swaRmverse_0.1.0.zip, r-release: swaRmverse_0.1.0.zip, r-oldrel: swaRmverse_0.1.0.zip |
macOS binaries: | r-release (arm64): swaRmverse_0.1.0.tgz, r-oldrel (arm64): swaRmverse_0.1.0.tgz, r-release (x86_64): swaRmverse_0.1.0.tgz, r-oldrel (x86_64): swaRmverse_0.1.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=swaRmverse to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.