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spant: MR Spectroscopy Analysis Tools

Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data. The package includes methods for spectral fitting: Wilson (2021) <doi:10.1002/mrm.28385> and spectral alignment: Wilson (2018) <doi:10.1002/mrm.27605>.

Version: 2.24.0
Depends: R (≥ 2.10)
Imports: abind, plyr, pracma, stringr, expm (≥ 1.0-0), signal, minpack.lm, utils, graphics, grDevices, ptw, mmand, RNifti, RNiftyReg, fields, numDeriv, nloptr, irlba, jsonlite
Suggests: viridisLite, shiny, ggplot2, miniUI, knitr, rmarkdown, testthat, ragg, doParallel, parallel, car
Published: 2024-11-14
DOI: 10.32614/CRAN.package.spant
Author: Martin Wilson ORCID iD [cre, aut], Yong Wang [ctb], John Muschelli [ctb]
Maintainer: Martin Wilson <martin at pipegrep.co.uk>
BugReports: https://github.com/martin3141/spant/issues/
License: GPL-3
URL: https://martin3141.github.io/spant/, https://github.com/martin3141/spant/
NeedsCompilation: yes
Language: en-GB
Citation: spant citation info
Materials: NEWS
In views: MedicalImaging
CRAN checks: spant results

Documentation:

Reference manual: spant.pdf
Vignettes: ABfit baseline options (source, R code)
Basis simulation (source, R code)
Introduction to spant (source, R code)
Metabolite simulation (source, R code)
Common preprocessing steps (source, R code)

Downloads:

Package source: spant_2.24.0.tar.gz
Windows binaries: r-devel: spant_2.24.0.zip, r-release: spant_2.24.0.zip, r-oldrel: spant_2.24.0.zip
macOS binaries: r-release (arm64): spant_2.24.0.tgz, r-oldrel (arm64): spant_2.24.0.tgz, r-release (x86_64): spant_2.24.0.tgz, r-oldrel (x86_64): spant_2.24.0.tgz
Old sources: spant archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.