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anndata: 'anndata' for R

A 'reticulate' wrapper for the Python package 'anndata'. Provides a scalable way of keeping track of data and learned annotations. Used to read from and write to the h5ad file format.

Version: 0.7.5.6
Depends: R (≥ 3.5.0)
Imports: assertthat, Matrix, methods, R6, reticulate (≥ 1.17)
Suggests: stats, testthat, knitr, rmarkdown
Published: 2023-03-17
DOI: 10.32614/CRAN.package.anndata
Author: Philipp Angerer ORCID iD [ccp] (flying-sheep), Alex Wolf ORCID iD [ccp] (falexwolf), Isaac Virshup [ccp] (ivirshup), Sergei Rybakov [ccp] (Koncopd), Robrecht Cannoodt ORCID iD [aut, cre, cph] (rcannood)
Maintainer: Robrecht Cannoodt <rcannood at gmail.com>
BugReports: https://github.com/dynverse/anndata/issues
License: MIT + file LICENSE
URL: https://anndata.dynverse.org, https://github.com/dynverse/anndata
NeedsCompilation: no
Materials: README NEWS
CRAN checks: anndata results

Documentation:

Reference manual: anndata.pdf
Vignettes: Getting started
Demo with scanpy

Downloads:

Package source: anndata_0.7.5.6.tar.gz
Windows binaries: r-devel: anndata_0.7.5.6.zip, r-release: anndata_0.7.5.6.zip, r-oldrel: anndata_0.7.5.6.zip
macOS binaries: r-release (arm64): anndata_0.7.5.6.tgz, r-oldrel (arm64): anndata_0.7.5.6.tgz, r-release (x86_64): anndata_0.7.5.6.tgz, r-oldrel (x86_64): anndata_0.7.5.6.tgz
Old sources: anndata archive

Reverse dependencies:

Reverse imports: BgeeDB, singleCellTK
Reverse suggests: dyngen, laminr, SCORPIUS, zellkonverter

Linking:

Please use the canonical form https://CRAN.R-project.org/package=anndata to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.