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Defines the classes used to explore, cluster and visualize distance matrices, especially those arising from binary data. See Abrams and colleagues, 2021, <doi:10.1093/bioinformatics/btab037>.
| Version: | 1.1.5 |
| Depends: | R (≥ 3.5), Thresher (≥ 1.1) |
| Imports: | methods, stats, utils, graphics, grDevices, KernSmooth, cluster, Rtsne, ClassDiscovery, Polychrome, dendextend, igraph, flexmix, umap, kohonen |
| Suggests: | knitr, rmarkdown |
| Published: | 2024-10-22 |
| DOI: | 10.32614/CRAN.package.Mercator |
| Author: | Kevin R. Coombes [aut, cre], Caitlin E. Coombes [aut] |
| Maintainer: | Kevin R. Coombes <krc at silicovore.com> |
| License: | Apache License (== 2.0) |
| URL: | http://oompa.r-forge.r-project.org/ |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | Mercator results |
| Reference manual: | Mercator.pdf |
| Vignettes: |
Mercator for Continuous Data (source, R code) Using the Mercator Package (source, R code) UMAP and SOM from Distance Matrices (source, R code) |
| Package source: | Mercator_1.1.5.tar.gz |
| Windows binaries: | r-devel: Mercator_1.1.5.zip, r-release: Mercator_1.1.5.zip, r-oldrel: Mercator_1.1.5.zip |
| macOS binaries: | r-release (arm64): Mercator_1.1.5.tgz, r-oldrel (arm64): Mercator_1.1.5.tgz, r-release (x86_64): Mercator_1.1.5.tgz, r-oldrel (x86_64): Mercator_1.1.5.tgz |
| Old sources: | Mercator archive |
| Reverse imports: | RPointCloud |
| Reverse suggests: | RCytoGPS, SillyPutty |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.