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fuseMLR: Fusing Machine Learning in R

Recent technological advances have enable the simultaneous collection of multi-omics data i.e., different types or modalities of molecular data, presenting challenges for integrative prediction modeling due to the heterogeneous, high-dimensional nature and possible missing modalities of some individuals. We introduce this package for late integrative prediction modeling, enabling modality-specific variable selection and prediction modeling, followed by the aggregation of the modality-specific predictions to train a final meta-model. This package facilitates conducting late integration predictive modeling in a systematic, structured, and reproducible way.

Version: 0.0.1
Depends: R (≥ 3.6.0)
Imports: R6, stats, digest
Suggests: testthat (≥ 3.0.0), UpSetR (≥ 1.4.0), caret, ranger, glmnet, Boruta, knitr, rmarkdown, pROC, checkmate
Published: 2024-12-17
DOI: 10.32614/CRAN.package.fuseMLR
Author: Cesaire J. K. Fouodo [aut, cre]
Maintainer: Cesaire J. K. Fouodo <cesaire.kuetefouodo at uni-luebeck.de>
BugReports: https://github.com/imbs-hl/fuseMLR/issues
License: GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: fuseMLR results

Documentation:

Reference manual: fuseMLR.pdf
Vignettes: How does fuseMLR work? (source, R code)

Downloads:

Package source: fuseMLR_0.0.1.tar.gz
Windows binaries: r-devel: fuseMLR_0.0.1.zip, r-release: fuseMLR_0.0.1.zip, r-oldrel: fuseMLR_0.0.1.zip
macOS binaries: r-release (arm64): fuseMLR_0.0.1.tgz, r-oldrel (arm64): fuseMLR_0.0.1.tgz, r-release (x86_64): fuseMLR_0.0.1.tgz, r-oldrel (x86_64): fuseMLR_0.0.1.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.