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SLIDE: Single Cell Linkage by Distance Estimation is SLIDE

This statistical method uses the nearest neighbor algorithm to estimate absolute distances between single cells based on a chosen constellation of surface proteins, with these distances being a measure of the similarity between the two cells being compared. Based on Sen, N., Mukherjee, G., and Arvin, A.M. (2015) <doi:10.1016/j.ymeth.2015.07.008>.

Version: 1.0.0
Depends: R (≥ 3.4.0)
Suggests: knitr, rmarkdown
Published: 2018-06-15
DOI: 10.32614/CRAN.package.SLIDE
Author: Gourab Mukherjee [aut], Arjun Panda [aut, cre], Ann Arvin [aut], Adrish Sen [aut], Nandini Sen [aut]
Maintainer: Arjun Panda <arjunpanda at gwu.edu>
License: GPL-3
NeedsCompilation: no
CRAN checks: SLIDE results

Documentation:

Reference manual: SLIDE.pdf
Vignettes: SLIDE Vignette

Downloads:

Package source: SLIDE_1.0.0.tar.gz
Windows binaries: r-devel: SLIDE_1.0.0.zip, r-release: SLIDE_1.0.0.zip, r-oldrel: SLIDE_1.0.0.zip
macOS binaries: r-release (arm64): SLIDE_1.0.0.tgz, r-oldrel (arm64): SLIDE_1.0.0.tgz, r-release (x86_64): SLIDE_1.0.0.tgz, r-oldrel (x86_64): SLIDE_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=SLIDE to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.